barSeed - Barley Seed Development Database

Probe ABC08902

Source Contig ABC08902

barSeed

Links

Affymetrix Source Sequence (1055 bp)

>ABC08902 1055
CGCCTGCGCTGACCTGTGGCCCCCTGCTCCCGCCTCCCTGTCCTCCTGTTATTACTTTCC
CCACCACGCCGATCTGCCGGACTGTTTCGCAAACCCTAACCCTAGCAAGCCCGCTTCACT
CCTCCAACAAGATCTCTCTCCGAATCTATGGATGCACCAGCTCCGATGTCTGCCCCACCG
CCCCCCGCCTCGTCCGATGATGATGCTAAGCCCGTCGACGAGGAGGGCGTAGAGATCCGC
GAGGTATGGGCGACGAACCTCGAGGCGGAGTTCGCCGTGATCCGTGACGTCGTCGGCGAT
TACTCGTACATCGCTATGGACACCGAGTTCCCGGGCATCGTGTGCCGCCCGCTCGGGAGC
TTTCGCTCCAATGACGAGTACAACTACGCCACCCTCAAGGCCAACGTCGACATGCTGAGC
CTCATCCAGCTTGGTCTCACTCTCTCCGACGAGAACGGCGCACTCCCTGCCAGGGGCACG
GGGGGGCGCCCCTGCGCCTGGCAGTTCAACTTTCGGGGCTTCGATCCGCGCTCAGACCCC
GCCAACGCCGACTCCATCGACCTGCTACGCAACAGTGGGATCGACTTCGACCGCTTCACC
ACCGAGGGTGCTGACACGGGCCACTTCGCCGAGCTGCTCATGTCGTCCGGCGTCCTGCTC
AACGCTGAGGTCCAGTGGGTCACATTTCACAGCGGAATCTACTTCCCGGTACTGTACGAC
ATCAAGCATCTCATGAAGTACTGCGGCAGCCTCCATGGTGGCTTGAGCAAGCTTGGTGAG
CTACTTGGTGTCCAACGTGTGGGGATCTGCCACCAGGCTGGGTCAAAATCACTGCTGACC
TTGCAGTGCTTCAAAAAGCTGAAGGAGGTGTATTTCAGAGGATCGACCGAGAATTATGCC
GGTGTGTTGTATGGTCTTATTTCTGATGGTGGGGAGAACAGACCACCAGCAGCTCTGCTC
ATCGAATGAGTAATGGATAGTCAAATAAGACAATGTTATGGTTGAAAAAAAAGGAAATAT
TTCTGTTAATATATGTCTCTGATCTGAAATTTGCT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_16489.1	1558	3e-179	341 - 703	98	357 / 364	CUST_3310_PI390587928 CUST_3309_PI390587928	ABC08901 ABC08902 ABC10269
MLOC_16489.2	691	0.0	1 - 691	99	690 / 691	None	ABC08901 ABC08902 ABC10269
AK252542.1	1296	0.0	694 - 1057	99	359 / 364	CUST_3310_PI390587928 CUST_3309_PI390587928	ABC08901 ABC08902 ABC10269
MLOC_10922.4	3242	1e-67	2627 - 3072	78	353 / 455	CUST_30103_PI390587928 CUST_17890_PI390587928	ABC04416 ABC08901 ABC08902 ABC10269
MLOC_10922.3	1379	1e-67	766 - 1211	78	353 / 455	CUST_30103_PI390587928	ABC04416 ABC08901 ABC08902 ABC10269
MLOC_10922.1	3332	1e-67	2717 - 3162	78	353 / 455	CUST_30103_PI390587928	ABC04416 ABC08901 ABC08902 ABC10269