barSeed - Barley Seed Development Database

Probe ABC04416

Source Contig ABC04416

barSeed

Links

Affymetrix Source Sequence (1122 bp)

>ABC04416 1122
GTGGATCTCCTCCTCCCGCCCCGCCCCGCCCCACCTCCCCGCCCACGATAGCCCCCGCCG
CTCGCCCGTGGGCCCCGCCGCCTCCCGCTCCTCCGCTCCGAGGGCTCCAGGAAGGAGAGG
GGAGGGAAAGCTCGAGCCTTTGATGCCCGGCAGCCGATGGCGACGCCGGCCGTAGACAAG
CCCGACGGGGTGGAGATCCGCGAGGTGTGGGCGGAGAACCTCGAGGCCGAGTTCGCCGTG
ATCCGGGACATCGTCGACGACTACCCCTACGTCGCCATGGACACCGAGTTCCCGGGCGTC
GTCTGCCGCCCGCTCGGCACCTTCAAGTCCAACGCTGACTTCAACTACGCCACGCTCAAG
GCCAACGTCGACATGCTCAAGCTCATCCAGCTCGGCCTCACCTTCTCGGACGAGCGCGGC
GGCCTCCCCGCCCTCGGCCCGGACGGCCGCCCCTGCGTCTGGCAGTTCAACTTCCGGGGC
TTCGACCCGCGGACCGACGTCGCCGCCGCCGACTCCATCGACCTGCTGCGCCGCAGCGGG
ATCGACTTCGCCCGCCACGCCGCCGAGGGGGCTGACTCGCGCCGCTTCGCCGAGCTGCTC
ATGTCCTCCGGGGTCGTCCTCAACGCCGAGATCCACTGGGTCACCTTCCACAGCGGCTAC
GACTTCGGCTACCTGCTCAAGCTGCTCACCGGCTCCAACCTGCCGGACACCAGCTCCGGC
TTCTTCGACCTCATCAGGATTTACTTCCCCGTGATCTACGACATCAAGCACTTGATGAGA
TTCTGCAACAGCCTCCACGGCGGACTGAACAAGCTCGCTGAGCTGCTCGACGTCGAGCGG
GTCGGAATCTGCCATCAGGCAGGCTCTGATTCTCTGCTCACAGCGCTCTCTTTCAACAAG
CTCAAGGAGTCATACTTCGGTGGATTGACTGAGAAATATGCTGGTGTGTTGTATGGTCTA
GGCACAGAGGGCGGGGAAACCACCTCTGTTCACTGAGTACTGGATAGTTAAATAAATGAT
GAACTATTTATGAGAGAAAAAAAAAAAAAAAAATGCTGATTGAATGTGTGATGTCTGATT
ATATCCCTTTGCTTGACACCGAAAAGGTACTACTTTTCCCTC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_58569.1	1995	0.0	130 - 1250	99	1108 / 1121	CUST_23615_PI390587928	ABC04416 ABC10269 ABC42882
MLOC_58569.4	1254	0.0	103 - 1209	99	1095 / 1107	None	ABC04416 ABC10269 ABC42882
MLOC_58569.3	1252	0.0	103 - 1208	99	1094 / 1106	None	ABC04416 ABC10269 ABC42882
MLOC_58569.5	814	0.0	36 - 814	99	778 / 779	None	ABC04416 ABC10269 ABC42882
MLOC_58569.2	819	2e-176	484 - 819	100	336 / 336	None	ABC04416
MLOC_10922.4	3242	2e-146	2296 - 3063	79	617 / 779	CUST_30103_PI390587928 CUST_17890_PI390587928	ABC04416 ABC08901 ABC08902 ABC10269
MLOC_10922.3	1379	2e-146	435 - 1202	79	617 / 779	CUST_30103_PI390587928	ABC04416 ABC08901 ABC08902 ABC10269
MLOC_10922.1	3332	2e-146	2386 - 3153	79	617 / 779	CUST_30103_PI390587928	ABC04416 ABC08901 ABC08902 ABC10269