barSeed - Barley Seed Development Database

Probe ABC08253

Source Contig ABC08253

barSeed

Links

Affymetrix Source Sequence (907 bp)

>ABC08253 907
CAGCCCTACTCCCGTCCCCGTCCACGCCGCCGCCGCCGCCGCGAATTCCGCCGGCGTCCG
CCCCGCGCGCGCGTGCTCTGCGCCCCCGTGTCGGCCCCGGCGGACCCCAGGACCTCCGGA
TCGGAGCCCCACGCGCCTCGCCATGGCGGCCAACGCGCTCCAGGCCCAGCTCAACGCGCT
CCTCGCCTCCATGTTCGCCACGGGTATGGTGGACGACCAGTTCCAGCAGCTGCAGTCGCT
GGAGGAGGGGGGCAGCGCGTCGGGCTTCGTCGCCGAGGTCGCCACCCTCTTCATCGAAGA
CGCCGACCGGATCATCGCCGACATCGCCGCCCTGCTGGACCAGCCCGCCGTGGACTTCGA
CAAGGTGGACGCGCACGTGCACCAGCTCAAGGGGAGCAGCTCCAGTGTTGGCGCTCAGAA
AGTGAAGCTCGCCTGCATGCACTTCCGCCAGTTCTATGAGGCAAAAAGTAAAGATGGGTG
CCTCATGGCGTTGGCCCTTGTTAGGAGTGAGTTCTGTGATGTGCGCAGCAAGTTCCAGAC
CATGATGCAGCTGGGGCAGCAGATCGAGGCCTGCAGTCCCAAGTAGAGTAGCAGTAAAAA
CTGAAGCAGAAGGAGCTTAGCTCCATGTGACCCCTGACATGATGGTGGGGGGGCAGTGTG
TATGTATCCCTTAAACTTGTTTGTAGGCAGTGTAACGGCTGTGTGTGTGCAGAACCGGAT
TGACCGATTCCAGCGGTGGAACTCCGGGCTCGCGACCCCTTGAAACGGAACTTTTTTGCC
CTGTGTTGGATGTACGTGTCAACCTTATACCCGTTTGTGTCGTGCCCGCCCTCAGGCTGC
GTGTAAGCTCTTACTGGTGACTTGGGTTTTGTTGTTGTTGTTGCTGCTGTAAAAAAAAAA
AAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK367738	832	0.0	21 - 832	98	799 / 813	CUST_22443_PI390587928 CUST_28712_PI390587928	ABC08253
MLOC_72595.1	404	0.0	3 - 404	100	402 / 402	CUST_22443_PI390587928	ABC08253
MLOC_16476.1	601	0.0	251 - 599	99	348 / 349	CUST_25831_PI390587928	ABC08253
MLOC_52819.1	232	4e-102	1 - 229	96	220 / 229	None	ABC08253
MLOC_36022.1	168	2e-66	1 - 156	96	150 / 156	None	ABC08253
MLOC_52819.2	197	1e-63	43 - 190	97	143 / 148	None	ABC08253
AK355597	2680	3e-59	74 - 250	90	161 / 178	CUST_7195_PI390587928	ABC06221 ABC08253 ABC18413 ABC44679 ABC48970