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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_25831_PI390587928Hv_44K_v2CTGCGTGTAAGCTCTTACTGGTGACTTGGGTTTTGTTGTTGTTGTTGCTGCTGTAAAAAA836GeneList: lightsteelblue1
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 3.0031.8361.0270.9250.4470.449
Raw 4551.9874274.1302157.1532925.553528.608574.429



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_16476.16019e-22251 - 30510055 / 55minus ABC08253
JLOC1JLOC1_11345.14965e-2298 - 15210055 / 55minus
Harvest21ABC082539073e-25837 - 89610060 / 60plusABC08253
Harvest35U35_177149073e-25837 - 89610060 / 60plus



Contig Sequence (907 bp)

>U35_17714 907 Hv_44K_v2
CAGCCCTACTCCCGTCCCCGTCCACGCCGCCGCCGCCGCCGCGAATTCCGCCGGCGTCCG
CCCCGCGCGCGCGTGCTCTGCGCCCCCGTGTCGGCCCCGGCGGACCCCAGGACCTCCGGA
TCGGAGCCCCACGCGCCTCGCCATGGCGGCCAACGCGCTCCAGGCCCAGCTCAACGCGCT
CCTCGCCTCCATGTTCGCCACGGGTATGGTGGACGACCAGTTCCAGCAGCTGCAGTCGCT
GGAGGAGGGGGGCAGCGCGTCGGGCTTCGTCGCCGAGGTCGCCACCCTCTTCATCGAAGA
CGCCGACCGGATCATCGCCGACATCGCCGCCCTGCTGGACCAGCCCGCCGTGGACTTCGA
CAAGGTGGACGCGCACGTGCACCAGCTCAAGGGGAGCAGCTCCAGTGTTGGCGCTCAGAA
AGTGAAGCTCGCCTGCATGCACTTCCGCCAGTTCTATGAGGCAAAAAGTAAAGATGGGTG
CCTCATGGCGTTGGCCCTTGTTAGGAGTGAGTTCTGTGATGTGCGCAGCAAGTTCCAGAC
CATGATGCAGCTGGGGCAGCAGATCGAGGCCTGCAGTCCCAAGTAGAGTAGCAGTAAAAA
CTGAAGCAGAAGGAGCTTAGCTCCATGTGACCCCTGACATGATGGTGGGGGGGCAGTGTG
TATGTATCCCTTAAACTTGTTTGTAGGCAGTGTAACGGCTGTGTGTGTGCAGAACCGGAT
TGACCGATTCCAGCGGTGGAACTCCGGGCTCGCGACCCCTTGAAACGGAACTTTTTTGCC
CTGTGTTGGATGTACGTGTCAACCTTATACCCGTTTGTGTCGTGCCCGCCCTCAGGCTGC
GTGTAAGCTCTTACTGGTGACTTGGGTTTTGTTGTTGTTGTTGCTGCTGTAAAAAAAAAA
AAAAAAA



Homology of Contig U35_17714 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None