barSeed - Barley Seed Development Database

Probe ABC44679

Source Contig ABC44679

barSeed

Links

Affymetrix Source Sequence (460 bp)

>ABC44679 460
AGTGATGAAGGTTGATGATTACAACTGAACGACTGAATCAGTCCACTTACACAATTAAAG
ATGGTTGATCAGTGATGAAGGTTGATGATTACAACTGAATGACTGAATCAGTCCACTTAC
ACAATTAAAGATGGTTGAAGAACCATGCTGGAGACAGAAGAACTTGGAAAGTGGTGAGAA
GATGTCGATGATGCCTACTTGGGACATTCAAATCAATACAACATAAAAATTTCTAAACCT
ATGTCTCATAGGAGAGTGGAATGAACTCCATTGTTAGTACATGTGCAATTGTTCTATTGT
GCAATTCTGTTCGTTTTTGCTATATTCTTGTGTAAGGAAATGTATCCATCAGATGAGTTA
TTGTGTTATGTAAATCTGGGAGATGTATTATGTGATGTTATATGATGGATGAGTTTAATT
CGACTTGGAGTTTTCTTGGNNNAAAAAAAANNAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK355597	2680	2e-77	2443 - 2650	92	191 / 208	CUST_7195_PI390587928	ABC06221 ABC08253 ABC18413 ABC44679 ABC48970
AK356240	1456	1e-74	1193 - 1451	86	236 / 274	None	ABC06221 ABC18413 ABC44679 ABC48970
MLOC_49322.1	611	5e-59	488 - 611	100	124 / 124	None	ABC44679
MLOC_49322.2	320	2e-58	198 - 320	100	123 / 123	None	ABC44679