barSeed - Barley Seed Development Database

Probe ABC18413

Source Contig ABC18413

barSeed

Links

Affymetrix Source Sequence (881 bp)

>ABC18413 881
GGTATAGTTCTTGGGAGCTCTAGTGTGAAGCCTCTATCCTGCAAANAGGAGCAAGTGATG
CTGATATTTTACGAGCAAAAGATCAGGAAGTGTGCAGAGCATTCAAATTCCCCCACAAAA
TTCAGGAATGTATCCCTGCCCGCGCCATCCTTTGACCTACCAGACATTGCAGATCTTTTT
GATTCCCCCTCTCTCCCCAACAGAGGTTCTGCTTGTATCATGGGAAGTTCATCAAGGAAA
AGAGAATCAAATGGATCAGCTATTCAAGATCCGTTTAAACCTTTTCTGGACACCTATTTT
ATTGGAATCTTCAACTGGTAGAAAATTATTTCAACTAATATCCTCTTCATGCCTGATATT
AAATAGCTATAAAGGAATCAACTCTCGTTTATCTGTGATGCTTATTCATACAAGTTAGCA
TATTTTCTCAACTGGTTGATATTTTTCTATATATTGTAGGTGGATCTATAAAATTAAATT
CAAGTTCATACTCATACATAAAATGTTTTTTTATAACTAGTAGCTTTTATACAACTCTGA
CATCCAGTATAATGGATATATTTTGTGATTTGAAGTTACTGATATCTGTTCTGGTCTAAT
ATCATGGTCTAATGTTTTTTGTTTTGTCTCTTTTTCTGTTGCTAGGAAAGTGGTGAGAAG
ATGTCGATGATGCCTACTTGGGACATTCAAATCAACACAACATAAAAATTTCTGAACCTA
TGTCTCATAGGAGAGTGGAATGAACTCCATTGTTAGCAGATGTGCCATTGTTCTATTGTG
CAATTCTGTCCGTTCTTGCTATATTCCTGTGTAAGAAAATGTATTCATAAGATGAGTTAT
TGTGTTATGTAAACCTAGGAGGATGTATTATGTGATGTTAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_48926.1	206	3e-94	1 - 203	98	199 / 204	None	ABC18413
AK355597	2680	1e-92	2442 - 2650	96	201 / 209	CUST_7195_PI390587928	ABC06221 ABC08253 ABC18413 ABC44679 ABC48970
AK356240	1456	3e-83	1192 - 1403	93	200 / 214	None	ABC06221 ABC18413 ABC44679 ABC48970
MLOC_33101.1	484	4e-77	2 - 203	93	187 / 202	None	ABC18413
MLOC_51468.1	723	3e-68	457 - 606	98	147 / 150	CUST_24069_PI390587928	ABC18413 ABC40315
MLOC_309.7	832	1e-67	684 - 832	98	146 / 149	None	ABC18413
MLOC_309.4	838	1e-67	690 - 838	98	146 / 149	None	ABC18413
MLOC_309.2	1054	7e-65	911 - 1054	98	141 / 144	None	ABC18413
MLOC_309.6	1053	7e-65	910 - 1053	98	141 / 144	None	ABC18413
MLOC_309.3	832	3e-64	690 - 832	98	140 / 143	None	ABC18413
MLOC_309.1	832	1e-63	691 - 832	98	139 / 142	None	ABC18413