barSeed - Barley Seed Development Database

Probe ABC07519

Source Contig ABC07519

barSeed

Links

Affymetrix Source Sequence (885 bp)

>ABC07519 885
GAGCGCAGGAGGACGCTATCCAAACACCCCCAGAGCGCCCCTCCGCCCCGCCTGAATCCG
TTCCGCCGCCGCTGCCGACGCAAGCCGAGGAAGCGAGGGAGGCCATGACGACCATTCGCC
GGTTCTGCTGCGACGACCTGCTCCGCTTCGCCTCCGTCAACCTCGACCACCTAACCGAGA
CCTTCAACATGTCCTTCTACATGACGTACATGGCTCGCTGGCCCGACTACTTCCACACCG
CCGTCAACCCCGGCGACCGCGTCATGGGATACATTATGGGTAAGGTTGAAGGACAAGGTG
AATCTTGGCATGGACATGTTACGGCAGTGTCTGTTGCCTCAGAATTTCGAAGACAGAAGT
TAGCCAAGACCCTTATGCATTTGCTGGAGGAAATCAGTGATAAGATGGATAAGGCCTATT
TTGTGGATCTCTTTGTAAGGGCATCCAACATGCCGGCGATAAGGATGTATGAAAAGTTGG
GCTATGTGGTTTATCGAAGGGTGCTTCGGTACTACTCAGGGGAAGAAGATGGCCTTGATA
TGAGAAAGGCGCTATCACAAGATGTTGACAAGAAGTCCATCATACCACTCAAGAGACCAA
TAACACCGGACGAACTTGAATACGACTGACATGCTAAATTCTAACCATCACTCTTGATGG
TTGTGTCCTCGTTGATCTGCACGACTTATATGGCAGCTCGACAAGCTATTGTCTCTAGTC
TTGTTGAATGAGTGATCGTGAATTTTCTATTTGCACATTCCTGTTAAGATTTGAGGCACT
TCAAGGTGGGCACTGATGATCAAACTAGTGCATGCTGAAGTGGAACGCCAATGTTTTTTG
GCTTGCTGTTTTTTTTCTGGCATGTCAATGTATTTTGAATTAGCA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_79574.1	915	0.0	1 - 787	100	787 / 787	None	ABC07518 ABC07519 ABC07520
MLOC_79574.2	411	1e-141	131 - 403	100	273 / 273	None	ABC07519
MLOC_8531.11	2152	2e-134	1800 - 2092	96	282 / 293	None	ABC07518 ABC07519 ABC07520
MLOC_8531.7	2304	2e-134	1852 - 2144	96	282 / 293	None	ABC07518 ABC07519 ABC07520
MLOC_8531.3	1595	2e-134	921 - 1213	96	282 / 293	None	ABC07217 ABC07219 ABC07518 ABC07519 ABC07520 ABC15446 ABC39062
MLOC_8531.4	2718	2e-134	2044 - 2336	96	282 / 293	None	ABC07217 ABC07219 ABC07518 ABC07519 ABC07520 ABC15446 ABC39062
MLOC_8531.8	1449	2e-134	769 - 1061	96	282 / 293	None	ABC07217 ABC07219 ABC07518 ABC07519 ABC07520 ABC15446 ABC39062
MLOC_8531.5	1542	2e-134	868 - 1160	96	282 / 293	None	ABC07217 ABC07219 ABC07518 ABC07519 ABC07520 ABC15446 ABC39062
MLOC_8531.12	1223	2e-134	871 - 1163	96	282 / 293	None	ABC07518 ABC07519 ABC07520
MLOC_8531.13	2600	2e-134	1849 - 2141	96	282 / 293	None	ABC07217 ABC07219 ABC07518 ABC07519 ABC07520 ABC15446 ABC39062
MLOC_8531.14	1693	2e-134	942 - 1234	96	282 / 293	None	ABC07217 ABC07219 ABC07518 ABC07519 ABC07520 ABC15446 ABC39062
MLOC_8531.15	1710	2e-134	959 - 1251	96	282 / 293	None	ABC07217 ABC07219 ABC07518 ABC07519 ABC07520 ABC15446 ABC39062
MLOC_8531.6	1451	2e-134	700 - 992	96	282 / 293	None	ABC07217 ABC07219 ABC07518 ABC07519 ABC07520 ABC15446 ABC39062
MLOC_8531.10	2115	2e-95	1850 - 2063	96	206 / 214	None	ABC07518 ABC07519 ABC07520
MLOC_8531.9	1889	3e-63	1752 - 1889	99	136 / 138	None	ABC07518 ABC07519 ABC07520