barSeed - Barley Seed Development Database

Probe ABC07237

Source Contig ABC07237

barSeed

Links

Affymetrix Source Sequence (864 bp)

>ABC07237 864
GCTCTCTTGCTCGCCCAGGCGGCCATGGAAGCTCTGGCCGTCGCCTCGCCGGCCCTGACG
CGGCCCCAGCCCCGCCGACGATGCCTCGCCGCAGGTTCTTGTAGCTCGTGGTGCCAGAGG
AGGACGAGCCAACTGCACACCTCCTTCAGCGGCGTCACGGTGCAGCTGCACAAACCGCTG
AGCCCAACGGCGACCAGTTCCCGGCGATCATCATCGTCAGTGGTGGCGGTGGCGATGTTG
TCGCGTCCGTCGATCCAGTTCATCCAGGGCACGGACGAGCAGACGATCCCGGACGTGCGG
CTGACCAAGTCCCGGGACGGCAGCAACGGGGTGGCCATCTTCACCTTCGAGCAGCCGTCG
GTGTTCGACTCGTCGGCGGAGCTGGGCGACATCACCGGATTCTACATGGTCGACGAGGAG
GGCACGCTGAGCTCCGTGGACGTCAGCGCCAAGTTCGTCAACGGCAAGCCGGCGGCCGTG
GAGGCCAAGTACGTGATGCGCACCCCCAGGGACTGGGACCGATTCATGCGCTTCATGGAG
CGCTACTCCCAGGCCAACGGCCTCCAGTTCCTCAAGAAGTAGCCATCCGTCCGTTCGTCC
ATCCAATCCATCATCATCATCATCATCATCCATGAATTCATCTTCGATTCTTATTCTTCT
TCTACATGTTTTTGGTTTCATGGATGGATTCCTGACAGAAAACTAGCTGCATTGAGTTCA
GTCATCGCTGTGACTGTTGATTTGTGTGCTCTGTGGCTGCGTACCCTGTTCATTGAGCAT
GCGATGCTTGATTCTTCATGCTGCCTTTTCTCCTTGATTCTTTGATAATATATATGCTTT
TCTGAACAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK251925.1	854	0.0	18 - 854	99	836 / 846	CUST_2240_PI390587928 CUST_2238_PI390587928	ABC07237 ABC07238 ABC07239
MLOC_12822.1	2034	0.0	948 - 1694	99	746 / 747	CUST_42059_PI390587928 CUST_2240_PI390587928 CUST_2238_PI390587928 CUST_42060_PI390587928	ABC07237 ABC07238 ABC07239 ABC08996 ABC08997
MLOC_12822.2	2123	0.0	1040 - 1786	99	746 / 747	CUST_2238_PI390587928 CUST_2240_PI390587928 CUST_42059_PI390587928 CUST_42060_PI390587928	ABC07237 ABC07238 ABC07239 ABC08996 ABC08997
MLOC_15730.1	956	2e-119	158 - 489	90	301 / 334	None	ABC07237 ABC07238 ABC07239
MLOC_15730.2	855	2e-119	126 - 457	90	301 / 334	None	ABC07237 ABC07238 ABC07239
MLOC_15730.3	947	2e-119	106 - 437	90	301 / 334	None	ABC07237 ABC07238 ABC07239