barSeed - Barley Seed Development Database

Probe ABC06000

Source Contig ABC06000

barSeed

Links

Affymetrix Source Sequence (1209 bp)

>ABC06000 1209
CTGCCTGCCGCGAGAGTCCTCCACTCCACAACAACCATCGAGAAACAAGCGCCTAATTCT
TCTCTCGCGCCATGGCGTCCACCAATGGCGGCTTTGCCAGTCCTCTCGCAGCGACCGTTC
CGGTTGAGGCGGTTCTCTTTGACATCGATGGCACTCTGTGCGACTCAGACCCTCTTCATC
ACGTCGCTTTCCAAGAAATGCTTCTTGCGATTGGGTACAACAACGGCGTGCCCATAGACG
ACGAGTTCTTCATAAACAACATTGCTGGAAGGAGCGATGTTGAAGCTGCCCAGAATTTGT
TTCCAGACTGGCCTCTCGAAAAGGGGCTGAAATTCCTAGAGGAGAAAGAGATCAAATACA
GAAGTTTGGCAATGGAGCGCCTAGAGCCTGTAAAGGGACTTGGCAAGCTGGTTCAGTGGG
TGAAAGATCACGGCTACAAACGTGCTGCAGTAACCAATGCCCCAAGGATCAATGCAGAGC
TGATGATCAAACTTCTTGGTCTATCAGACTTCTTCCAGGCCGTGATAGTTGGAGGTGAAT
GCGAGAAGCCAAAGCCCGCACCCTTCCCATACCTGAAGGCCCTCAAGGAGCTCGAAGTAT
CTGCGGCACACACCTTTATCTTCGAGGACTCTGCTTCAGGGACGCGTGCGGGTGTTGCTG
CGGGGATGCCCGTCGTCGCCGTGTTGACGAGGAACCCGGAGAAGTCCCTAGAGGAAGCCG
GGGCCGCATTGATCGTCAATGACTATGAAGACCAGAAACTGTGGAACGCGCTCGAGGAGA
TTGACAGGGAGGAAGCGAAGCTAAAGAGTGGTGGGGCATGAGACGATGATGGCGACGAAC
AGTTCATTAGACCACTGCAAACTTACCCATTCTTATTATTTATAAGGGAATCTGCGCCCT
GAAGTTATTATGGTAGGACAGAGCTCATCTAGGTATTTTGAGCTTTTTAGTTTGGTATAT
GTGTTTGTTTCTTGTTGTCTATTCCTTCTGTACCTAAATACTTGTAGTTGGGGAGCTTCT
GGACCTAAATATTTGTAGTTGGGGAGGTACAGAGGGAGCAGGAGAGAAGCAAATAAGAAA
CTTTTGTGCCCATGACATGAGATTGTTCGGTTGATGGGGCCTATGAAAATGGCATATCTA
TCAGGCCCATTGCCTACCAGCTCTGAATTTTGACTGGTGAGCACTCTGTTTAAAAAAAAA
AAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_66683.2	3840	2642 - 3832	99	1187 / 1191	CUST_25300_PI390587928	ABC06000
AK373570	2040	883 - 2040	100	1158 / 1158	None	ABC06000
AK365753	4088	18 - 1112	100	1095 / 1095	CUST_18804_PI390587928 CUST_36016_PI390587928	ABC06000 ABC15484 ABC16853
MLOC_66683.3	1135	184 - 1135	99	948 / 953	None	ABC06000