barSeed - Barley Seed Development Database

Probe ABC15484

Source Contig ABC15484

barSeed

Links

Affymetrix Source Sequence (989 bp)

>ABC15484 989
GTCAGGGTGGGCATGAACAGGTTCGGCGACCTCAACCCCAGCGAGGTCGTCGAGCAGTTC
ACCGGGTTCAACAACACCAGGCTTCCGCACCCCGAAGCCCTCACCCCTCCCCTACCACTC
CTGGAAGCCTTGCTGCGTCGACTGGCGCTCCAGCGGCGCCGTCACCGGCATCAAGTTTCA
AGGCTCTTGCTTGTCGTGCTGGGCGTTCGCGGCCGTGGCGGCCATCGAAGGCATGAACAA
GATCAGGACCGGCGAGCTGGTGTCGCTCTCGGAGCAGCAGCTCGTGGACTGCGACACCGG
TAGCAGCGGCTGCAGCGGTGGGCGCTCCGACACGGCGCTCGGCCTCGCGGCAACCCGCGG
CGGCATCACGTCGGAGGCCAAGTACCCGTACAGCGGCATCCAGGGCACCTGCAACGTGGA
CAAGCTCTTGTTCGACAACCAGGCGTCCGTCAAGGGCTTCAAGGCCGTGCCTCCCAACGA
CGAGCATCAGCTGGCGCTCGCCGTGGCGCGGCAGCCCGTGACGGTGTACATCGACGCCAG
CGCGTGGGAGTTTCAGTTCTACACCGGTGGCATCTACCGCGGCCCTTGCTCCTCCGATGC
GTCGAGGGTGAACCACGCCGTCACCATCGTCGGCTACTGCGAAGGCCCCGGAGAGGACAA
CAAGTACTGGATCGCCAAGAACTCGTGGAGCAACGACTGGGGTGACCAGGGCTACATCTA
CCTCGCCAAGGACGTGCCGTGGAAGACGGGAACCTGCGGCCTCGCCACCTCGCCCTTCTA
CCCAACGGCTTGACGACCCATGCCGGTTTGCCAGTGGAGCGTTTGCATTCGCCAGCTTCT
TATGTTGTTTTATTTTATTTGAGAGAGGCAAATTGCATACATAGGTCACCAAATGATTGA
TGGATGCGTGGTGTTATTTTTTTCGGCTGTGATAATGCATAATAAGATATTAATGAAGTA
CAAAATCATTTGGCTCAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_3692.2	1274	0.0	316 - 1274	99	958 / 960	CUST_19127_PI390587928	ABC06007 ABC15484
MLOC_3692.1	1323	0.0	396 - 1323	99	928 / 929	CUST_19127_PI390587928	ABC06007 ABC15484
MLOC_3692.3	1378	1e-93	316 - 505	99	190 / 191	CUST_19127_PI390587928	ABC06007 ABC15484
MLOC_68042.1	1949	0.0	310 - 1118	87	716 / 823	CUST_11209_PI390587928 CUST_26164_PI390587928	ABC06007 ABC15484
MLOC_25346.1	1173	0.0	193 - 972	86	681 / 793	CUST_22598_PI390587928 CUST_24911_PI390587928	ABC06007 ABC15484 ABC31215
AK251286.1	1280	0.0	354 - 1131	83	659 / 792	None	ABC15484
AK365753	4088	0.0	1448 - 2225	83	658 / 792	CUST_18804_PI390587928 CUST_36016_PI390587928	ABC06000 ABC15484 ABC16853
AK252936.1	1316	0.0	354 - 1132	83	657 / 793	None	ABC15484