- Probe ABC05842
- Source Contig ABC05842
Affymetrix Source Sequence (943 bp)
>ABC05842 943 GATTCTTCCTTGCAGCTCAGACAGCAGCCATTTCCTTCGGACTAGCGTCAACACACTGAG CAATCCATCCATCACACGCACAGCGCAAGAGGTTTAATTAATCGTCCGAGAAGAGCAGAG GAGTGAGCAAGGTAGCCATGGGGAGGTCTCCTTGCTGCGAGAAGATGGGGCTCAAGAGGG GGCCGTGGACGGCGGAGGAGGACATGACCCTGGTGGCTCACATCGAGCAGCACGGCCACA GCAACTGGCGGGCGCTGCCGAATCAGGCCGGCCTGCTGCGCTGCGGCAAGAGCTGTCGCC TCCGGTGGATCAACTACCTGCGCCCCGACATCAAGCGCGGCAACTTCACCAGCGAGGAGG AGGGCGCCATCATCCAGCTCCACGCCATGCTCGGCAACAGATGGTCCACCATTGCCGCCA GGCTTCCTGGGAGGACGGACAACGAGATCAAGAACGTCTGGCACACACACCTCAAGAAGC GACTCCAGTCCTCGTCCAAGCCGTCAGGCCAGGCAGCGCCTAAGCGCAAAGCCAAGAAGC CTGCTATGGCTGCAGCGAGCACAGCCGATGGCTCGGCCTCCGTGCCAGTGTCGCCGGAGC AACCCATCTCGTCGTCCGCCACCGATTACTCGATGGCATCGTCGTTGGAGAACACAGACA GCTTTACATCGGAGGAGTTTCAGATTGAGGACAGCTTTTGGTCGGAGACACTTGCAATGA CGGTGGACAACTCCGGTTCCCCGATGGACGCCGGCGTCACCTTGGGCGCCCAAGACAGTG CATCGCCCTCGTCCAGCAACGACGAGGTGGACTTCTGGGTCAGACTGTTCATGCAGGCTG GCGAGGTGCAGAGTTTGTCTCACATTTAGGCAGAGGATATCGGCTCGGTCTAGTTTGCTT GTTCATTTTATGTCTCTCAATATTATTTAAAGTGCCTGGCATA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK371190 | 1134 | 0.0 | 15 - 954 | 99 | 936 / 942 | CUST_36377_PI390587928 | ABC05841 ABC05842 |
| MLOC_64947.1 | 640 | 0.0 | 1 - 506 | 99 | 503 / 508 | CUST_36377_PI390587928 | ABC05842 |
| MLOC_34646.1 | 990 | 0.0 | 166 - 985 | 86 | 715 / 836 | None | ABC05842 |
| AK368657 | 915 | 0.0 | 164 - 891 | 87 | 644 / 743 | None | ABC05841 ABC05842 |
| MLOC_43806.1 | 904 | 1e-167 | 3 - 472 | 89 | 432 / 484 | None | ABC05841 ABC05842 |
| AK353929 | 1304 | 3e-103 | 148 - 495 | 86 | 301 / 349 | None | ABC05841 ABC05842 |
| MLOC_39453.1 | 270 | 1e-82 | 1 - 170 | 99 | 169 / 170 | None | ABC05842 |
| MLOC_71418.2 | 1691 | 2e-80 | 1080 - 1420 | 83 | 282 / 341 | None | ABC05841 ABC05842 |
| MLOC_71418.3 | 1693 | 3e-79 | 1080 - 1422 | 83 | 283 / 343 | None | ABC05841 ABC05842 |
| AK369689 | 1661 | 3e-74 | 268 - 596 | 82 | 270 / 329 | CUST_287_PI390587928 | ABC05841 ABC05842 ABC09252 |
| MLOC_53640.1 | 1232 | 3e-74 | 647 - 975 | 82 | 270 / 329 | CUST_287_PI390587928 | ABC05841 ABC05842 ABC09252 |
| AK358405 | 1090 | 2e-56 | 79 - 414 | 79 | 273 / 345 | CUST_42_PI390587928 CUST_32622_PI390587928 | ABC05842 ABC09250 ABC09252 ABC14337 ABC40938 ABC53019 |
| MLOC_6696.1 | 1452 | 2e-55 | 690 - 1034 | 78 | 273 / 348 | None | ABC05842 |