barSeed - Barley Seed Development Database

Probe ABC05217

Source Contig ABC05217

barSeed

Links

Affymetrix Source Sequence (1126 bp)

>ABC05217 1126
GTTTTTTTAATTAGCAGAGTCGCTCTTTCTAGGACAGAGGGAGGAGGATTATCTTAACAG
TACTGGATCAGTTCGATGTACTAGTAGCTTACTTAGGGCTTGGCAGCCTTTAATCTTCTC
TATAAATACCAGTGCCTCCGTGTCTTCTTCCTTCACCAGCCATACAGCGAGCAAATTAGA
AACACAGATCAAATAGAAGAGAGCTCTTCGGCTAATCAGCAATGGCGACCAAGATCTACA
TAGTGTACTACTCGACCTGGGGACACGTCGCGACGCTGGCGGAGGAGATGAAGAAGGGCG
CCGACTCCGTCCCTGGCGTGGAGGTCACCATCTGGCGGGTGCCGGAGACGCTGCCAGAGG
AGGTGCTCGGGAAGATGCACGCCGCGCCGGGGCGCGAGGACCACCCCGTGATCACGGCGA
GCCAGCTGGCCGAGGCCGACGGCATCCTGTTCGGCTTTCCGACGCGGTTCGGCATGATGG
CGGCGCAGATGAAGGCCTTCTTCGACTCCACCGGCGGCCTCTGGCAGGCGCAGAGCCTCT
CGGGAAAGCCCGCGGGCGTCTTCTTCGCCACGGGCACCCAGGGCGGCGGGCAGGAGACCA
CGGCCCTCACGGCCGTGACCCAGCTGACGCATCACGGCATGCTGTTCGTGCCGGTCGGGT
ACACGCACGGCGCCGGCATGTTCGCCATGGACGAGGTCAAGGGCGGCAGCCCGTACGGTG
CCGGCACCTTCGCTGGAGCCGATGGCAGCAGGGTGCCCAGCGACGCCGAGCTCGCCCTGG
CGGCGCACCAGGGCAAGTACTTTGCCGGCATTGCCAAGAAGCTCAAAGCTGTCTGAAGTC
CGATCACCGGCCGTGTCCCGTGATTCATATCAATTAGACAGCAACGGGCGCGGTCGAGTG
CGACTGTGCGAGATGATTTGACACATCATTTCCACTGGAGCAGATTTACACAATTATAGA
CAATTCAACTGTACTGCATTTAATTTCTTGTTTGAGAAATAATACAACTAGATGCGTTGT
TGATGTTTTTGGACTTTCATGATTCTTGTAATCAGTCTATCTTAAAATATAAGGCATATT
AGTTTTTTGAAAAGTCAAACTTCTTTAGATTTGATCAAATTTTTAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_67257.1	1140	0.0	129 - 1140	100	1012 / 1012	CUST_38667_PI390587928 CUST_10401_PI390587928	ABC05216 ABC05217 ABC05218
MLOC_67257.2	966	0.0	189 - 966	100	778 / 778	CUST_38667_PI390587928 CUST_10401_PI390587928	ABC05216 ABC05217 ABC05218
MLOC_15151.1	986	0.0	142 - 753	91	560 / 613	CUST_10402_PI390587928	ABC05216 ABC05217 ABC05218
MLOC_38677.1	890	0.0	193 - 799	91	550 / 607	CUST_39144_PI390587928	ABC05216 ABC05217
MLOC_10485.2	898	0.0	122 - 755	89	565 / 634	None	ABC05217
MLOC_10485.3	1030	0.0	254 - 887	89	565 / 634	None	ABC05217
MLOC_10485.1	937	0.0	188 - 821	89	565 / 634	None	ABC05217
MLOC_15151.2	536	1e-147	156 - 535	92	349 / 381	CUST_10402_PI390587928	ABC05216 ABC05217 ABC05218
AK361199	4471	1e-93	427 - 828	82	334 / 406	CUST_20450_PI390587928 CUST_24431_PI390587928 CUST_24625_PI390587928 CUST_10384_PI390587928	ABC02932 ABC05216 ABC05217 ABC05218 ABC14249 ABC47180
MLOC_61203.1	1120	1e-93	231 - 632	82	334 / 406	None	ABC05216 ABC05217 ABC05218 ABC47180