- Probe ABC04560
- Source Contig ABC04560
Affymetrix Source Sequence (1523 bp)
>ABC04560 1523 GCTCGTTTGACCTAATCTAAAGAAAACCACTAGCCCCCTTCTCCCACCGCGAGCCCTCTC TCTGTCCCCCTCCCACGACTCCTCTGCCGCCGTCACCTATGTCGCTCGATTCCGGCGAGT TGATGCGGCTCTCGCCGTTGCGCAGCACACCTCCGTGGTCCCCTCGCGCCACTCTCTCCT CCCCTCCCGTCAGATCCATCTCTCGCGCCCGCAACCCTCACCCGTGGTGGACCTCGTTGC CAGATCGCTGGATCCGATGGACGTCAGCTCCAACACGACCACGACCACGAGCAGCGGCGG AGGGAAGGACGGGGACAAGGGCAAGGGCGCCTCGGTCTCCTTCACGGAGGGCGAGAAGGT GCTCGCCTACCACGGGCCCCTCCTCTACGAGGCCAAGATGGAACGTCGGAGTCGTCTGCA TCGTGAAAGCTCGGGCCGGCCACGGACCGGCGAGCGACCCCCAGAACTTGTATGCAAAGA GAAGAAGGGAGAAGATCAACGACAAGCTTTGGGTTTTGCAGAAGCTGGTGCCCAACGGAA CCAAAGTGGATCTCAGCACTATGCTCGAGGAGGCAGTCCTCTACGTCAAGTTTTTGCAGC TACAGATCAAGTAGCTCGGAGAGGAAGAAGAAAGAAGAGGAGTTGCATGCTGGATGAATC TAGATAACTCCAACCCAACCCCAGTACTTGTAGATGTTATACATACAGTAGATGTTATAT ATTCGGTCATCCACTTTTGACTGTCCGCTCGAGCGGCTCAATGAGCTTAATTTGAGGGCA AAGAACACAGCTTAACATCTATCTATAGCATCTCTCGCCACATCTTAGTTTCGATTTAGT GATGCAAAAATAAGTTTAATACTGTATTTAGCAATGTTGAAACTAGAATTGGTAAGTACG CCCTATCGTGGTAGCTACAAGCTCCTGGTCACCTATATGCTCATCTAATTACAGTGGCGT TTGAACTAGTTTTGAAACTGATTAGATGGATGTGTGAAGTGCTTCTTCCTTCCTTATAAA GCTGGCCTATTGTATTGGAACAGATGCGTGAAGTGTTTCTTCCTTCCAGTGGCGTTCGGC GAATCTGCTACAGTCCGTGTGCTTCATTTCACCAAGTAAAATAAAATCACATGAATGGCG ATTCAAAATTCTTTACCATTTCCACCGTAATATTTCATTTGTACTATGCACATCTGCTGA AGATTGATGAGGAAGACTTTGGAGGCCATGCCGCCCTAATTCAGGAGGGGCTCTTTGCCT CGTTCACCCTTTTCCTGCTTTCATGGACTCTAGTATACAACTTGGCTCACTTTTGAGAAG CCCGTCTGTAGATCTATGATGCTGGATTTTCGTAGTTCATTTCATTCACTCTTTTGTACA ATTAGCTATCATGGATGTAATTTCACAGTACTGTAGAACAACGTCATGGAGCTGTACAAT AACTTATTGTGTTATGTAAACATGAGAGATGTATTATGTGATGTTATATGATGGATGATT TTAATTAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_9319.1 | 750 | 0.0 | 1 - 750 | 99 | 748 / 750 | CUST_9744_PI390587928 | ABC04557 ABC04559 ABC04560 ABC16638 ABC24152 ABC38793 |
| MLOC_9319.2 | 720 | 0.0 | 1 - 717 | 99 | 715 / 717 | CUST_9744_PI390587928 | ABC04557 ABC04559 ABC04560 ABC16638 ABC24152 ABC38793 |
| MLOC_9319.3 | 2422 | 0.0 | 1724 - 2422 | 100 | 699 / 699 | CUST_3619_PI390587928 CUST_9744_PI390587928 | ABC04557 ABC04559 ABC04560 ABC16638 ABC24152 ABC38793 |
| MLOC_9319.4 | 2346 | 0.0 | 1673 - 2343 | 100 | 671 / 671 | CUST_9744_PI390587928 CUST_3619_PI390587928 | ABC04557 ABC04559 ABC04560 ABC16638 ABC24152 ABC38793 |
| MLOC_26778.1 | 1224 | 7e-132 | 832 - 1117 | 97 | 276 / 286 | CUST_38869_PI390587928 | ABC04556 ABC04557 ABC04559 ABC04560 ABC16638 ABC38793 |
| MLOC_46462.1 | 282 | 1e-129 | 4 - 282 | 97 | 270 / 279 | CUST_41579_PI390587928 | ABC04556 ABC04557 ABC04559 ABC04560 ABC16638 ABC38793 |
| AK369363 | 820 | 9e-126 | 364 - 646 | 95 | 273 / 286 | CUST_16520_PI390587928 CUST_13621_PI390587928 | ABC04556 ABC04557 ABC04559 ABC04560 ABC09911 ABC16638 ABC38793 |
| MLOC_30179.1 | 485 | 4e-124 | 199 - 485 | 95 | 272 / 287 | None | ABC02510 ABC04560 |
| MLOC_78352.1 | 278 | 4e-119 | 1 - 278 | 95 | 263 / 278 | None | ABC04557 ABC04559 ABC04560 ABC16638 |
| MLOC_8653.1 | 269 | 3e-115 | 44 - 269 | 100 | 226 / 226 | None | ABC04559 ABC04560 |
| MLOC_34024.1 | 267 | 3e-111 | 1 - 267 | 94 | 252 / 267 | None | ABC04559 ABC04560 |
| MLOC_39715.1 | 290 | 1e-95 | 12 - 230 | 96 | 210 / 219 | None | ABC04559 ABC04560 |
| MLOC_51035.1 | 1743 | 1e-89 | 597 - 806 | 95 | 200 / 210 | None | ABC04559 ABC04560 |
| MLOC_42591.1 | 182 | 4e-84 | 4 - 182 | 98 | 176 / 179 | None | ABC04559 ABC04560 |
| MLOC_27687.1 | 211 | 2e-83 | 1 - 211 | 93 | 197 / 211 | None | ABC04560 |
| MLOC_52211.1 | 567 | 6e-83 | 1 - 205 | 94 | 193 / 205 | None | ABC04559 ABC04560 ABC24152 |
| MLOC_30589.1 | 194 | 4e-80 | 5 - 194 | 95 | 181 / 190 | CUST_41579_PI390587928 | ABC04556 ABC04557 ABC04559 ABC04560 ABC16638 ABC38793 |
| MLOC_39715.2 | 262 | 8e-77 | 1 - 178 | 96 | 171 / 178 | None | ABC04559 ABC04560 |
| MLOC_31149.1 | 206 | 4e-75 | 36 - 204 | 97 | 164 / 169 | None | ABC04559 ABC04560 |
| MLOC_50537.1 | 221 | 2e-73 | 26 - 221 | 92 | 181 / 196 | None | ABC04559 ABC04560 |
| MLOC_40119.1 | 154 | 6e-63 | 2 - 154 | 95 | 146 / 153 | None | ABC04559 ABC04560 |
| MLOC_27943.1 | 145 | 8e-62 | 2 - 143 | 97 | 138 / 142 | None | ABC04559 ABC04560 |
| MLOC_35590.1 | 131 | 3e-56 | 6 - 131 | 98 | 124 / 126 | None | ABC04559 ABC04560 |
| MLOC_22469.12 | 2279 | 2e-52 | 909 - 1046 | 94 | 130 / 138 | CUST_6371_PI390587928 | ABC02510 ABC04560 |
| MLOC_22469.3 | 2312 | 2e-52 | 1244 - 1381 | 94 | 130 / 138 | None | ABC02510 ABC04560 |
| MLOC_22469.4 | 2073 | 2e-52 | 1244 - 1381 | 94 | 130 / 138 | None | ABC02510 ABC04560 |
| MLOC_22469.2 | 2077 | 2e-52 | 1244 - 1381 | 94 | 130 / 138 | None | ABC02510 ABC04560 |
| MLOC_22469.11 | 2104 | 2e-52 | 1274 - 1411 | 94 | 130 / 138 | None | ABC02510 ABC04560 |
| MLOC_22469.9 | 2169 | 2e-52 | 1338 - 1475 | 94 | 130 / 138 | None | ABC02510 ABC04560 |