- Probe ABC04559
- Source Contig ABC04559
Affymetrix Source Sequence (1363 bp)
>ABC04559 1363 AGGCCTAATCTAAAGAAAACCCTAGCCCCCTTCTCCCACCGCGAGCCCTCTCTCTGTCCC CCTCCCACGACTCCTCTGCCGCCGTCACCTATGTCGCTCGATTCCGGCGAGTTGATGCGG CTCTCGCCGTTGCGCAGCACACCTCCGTGGTCCCCTCGCGCCACTCTCTCCTCCCCTCCC GTCAGATCCATCTCTCGCGCCAGCAACCCTCACCCGTGGTGGACCTCGTTGTCAGATCGC TGGATCCGATGGACGTCAGCTCCAACACGACCACGACCACGAGCAGCGGCGGAGGGAAGG ACGGGGACAAGGGCAAGGGCGCCTCGGTCTCCTTCACGGAGGGCGAGAAGGTGCTCGCCT ACCACGGGCCCCTCCTCTACGAGGCCAAGATGGAACGTCGGAGTCGTCTGCATCGTGAAA GCTCGGGCCGGCCACGGACCGGCGAGCGACCCCCAGAACTTGTATGCAAAGAGAAGAAGG GAGAAGATCAACGACAAGCTTTGGGTTTTGCAGAAGCTGGTGCCCAACGGAACCAAAGTG GATCTCAGCACTATGCTCGAGGAGGCAGTCCTCTACCTTAAGTTTTTGCAGCTACAGATC AAGTAGCTCGGAGAGGAAGAAGAAAGAAGAGGAGTTGCATGCTGGATGAATCTAGATAAC TCCAACCCAACCCCAGTACTTGTAGATGTTATACATACAGTAGATGTTATATATTCGGTC ATCCACTTTTGACTGTCCGCTCGAGCGGCTCAATGAGCTTAATTTGAGGGCAAAGAACAC AGCTTAACATCTATCTATAGCATCTCTCGCCACATCTTAGTTTCGATTTAGTGATGCAAA AATAAGTTTAATACTGTATTTAGCAATGTTGAAACTAGAATTGATGCGTGAAGTGTTTCT TCCTTCCAGTGGCGTTCGGCGAATCTGCTACAGTCCGTGTGCTTCATTTCACCAAGTAAA ATAAAATCACATGAATGGCGATTCAAAATTCTTTACCATTTCCACCGTAATATTTCATTT GTACTATGCACATCTGCTGAAGATTGATGAGGAAGACTTTGGAGGCCATGCCGCCCTAAT TCAGGAGGGGCTCTTTGCCTCGTTCACCCTTTTCCTGCTTTCATGGACTCTAGTATACAA CTTGGCTCACTTTTGAGAAGCCCGTCTGTAGATCTATGATGCTGGATTTTCGTAGTTCAT TTCATTCACTCTTTTGTACAATTAGCTATCATGGATGTAATTTCACAGTACTGTAGAACA ACGTCATGGAGCTGTACAATAACTTATTGTGTTATGTAAACATGAGAGATGTATTATGTG ATGTTATATGATGGATGATTTTAATTAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_9319.1 | 750 | 2e-137 | 485 - 750 | 100 | 266 / 266 | CUST_9744_PI390587928 | ABC04557 ABC04559 ABC04560 ABC16638 ABC24152 ABC38793 |
| MLOC_9319.2 | 720 | 6e-122 | 480 - 717 | 100 | 238 / 238 | CUST_9744_PI390587928 | ABC04557 ABC04559 ABC04560 ABC16638 ABC24152 ABC38793 |
| MLOC_9319.4 | 2346 | 6e-122 | 2106 - 2343 | 100 | 238 / 238 | CUST_3619_PI390587928 CUST_9744_PI390587928 | ABC04557 ABC04559 ABC04560 ABC16638 ABC24152 ABC38793 |
| MLOC_9319.3 | 2422 | 2e-137 | 2157 - 2422 | 100 | 266 / 266 | CUST_3619_PI390587928 CUST_9744_PI390587928 | ABC04557 ABC04559 ABC04560 ABC16638 ABC24152 ABC38793 |
| MLOC_26778.1 | 1224 | 6e-132 | 832 - 1117 | 97 | 276 / 286 | CUST_38869_PI390587928 | ABC04556 ABC04557 ABC04559 ABC04560 ABC16638 ABC38793 |
| MLOC_46462.1 | 282 | 1e-129 | 4 - 282 | 97 | 270 / 279 | CUST_41579_PI390587928 | ABC04556 ABC04557 ABC04559 ABC04560 ABC16638 ABC38793 |
| AK369363 | 820 | 8e-126 | 364 - 646 | 95 | 273 / 286 | CUST_16520_PI390587928 CUST_13621_PI390587928 | ABC04556 ABC04557 ABC04559 ABC04560 ABC09911 ABC16638 ABC38793 |
| MLOC_78352.1 | 278 | 4e-119 | 1 - 278 | 95 | 263 / 278 | None | ABC04557 ABC04559 ABC04560 ABC16638 |
| MLOC_8653.1 | 269 | 6e-112 | 44 - 269 | 99 | 224 / 226 | None | ABC04559 ABC04560 |
| MLOC_34024.1 | 267 | 5e-108 | 1 - 267 | 94 | 250 / 267 | None | ABC04559 ABC04560 |
| MLOC_39715.1 | 290 | 2e-92 | 12 - 230 | 95 | 208 / 219 | None | ABC04559 ABC04560 |
| MLOC_51035.1 | 1743 | 2e-86 | 597 - 806 | 94 | 198 / 210 | None | ABC04559 ABC04560 |
| MLOC_42591.1 | 182 | 4e-84 | 4 - 182 | 98 | 176 / 179 | None | ABC04559 ABC04560 |
| MLOC_52211.1 | 567 | 5e-83 | 1 - 205 | 94 | 193 / 205 | None | ABC04559 ABC04560 ABC24152 |
| MLOC_30589.1 | 194 | 3e-80 | 5 - 194 | 95 | 181 / 190 | CUST_41579_PI390587928 | ABC04556 ABC04557 ABC04559 ABC04560 ABC16638 ABC38793 |
| MLOC_39715.2 | 262 | 7e-77 | 1 - 178 | 96 | 171 / 178 | None | ABC04559 ABC04560 |
| MLOC_50537.1 | 221 | 1e-73 | 26 - 221 | 92 | 181 / 196 | None | ABC04559 ABC04560 |
| MLOC_31149.1 | 206 | 7e-72 | 36 - 204 | 96 | 162 / 169 | None | ABC04559 ABC04560 |
| MLOC_40119.1 | 154 | 5e-63 | 2 - 154 | 95 | 146 / 153 | None | ABC04559 ABC04560 |
| MLOC_27943.1 | 145 | 1e-58 | 2 - 143 | 96 | 136 / 142 | None | ABC04559 ABC04560 |
| MLOC_35590.1 | 131 | 3e-56 | 6 - 131 | 98 | 124 / 126 | None | ABC04559 ABC04560 |