barSeed - Barley Seed Development Database

Probe ABC03686

Source Contig ABC03686

barSeed

Links

Affymetrix Source Sequence (1033 bp)

>ABC03686 1033
ACGTCTAGCTAGCAATCAACCTCCAATCACAACTTGATTTCTTCCAACCCAACCTAGTTA
GTTCTCAGCAGTGAGTGGCAGACACAGAGCTCCGTCTCGATCCATCTCCACGGAATCAAG
AAGATATATCAACAATGGCGGGCGTCGGTCGTAACATGGTGGCGCCGCTGCTGGTGCTGA
ACCTCATCATGTACGTCATCGTCATCGGGTTCGCGAGCTGGAACCTCAACCACTTCATCA
ACGGCCTCACCAACCGCCCCGGCGTCGGCGGCAACGGCGCCACCTTCTACTTCCTCGTCT
TCGCCATCCTCGCCGGGGTCGTCGGCGCAGCATCCAAGCTCGCCGGCGTGCACCACGTGC
GCACCTGGCGCGGCGACAGCCTCGCCACCTCCGCGTCCTCTTCGCTGGTGGCCTGGGCCA
TCACCGCATTGGCGTTCGGGCTGGCGTGCAAGGAGATCCACATCGGCGGATACCGTGGGT
GGCGTCTCAGGGTGCTGGAGGCGTTTGTCATCATCCTCGCCTTCACGCAGCTGCTCTACG
TGCTTGCTCTCCACTCCGGGCTCTTCGGAAACCAGTTCGGTGACCATGCTGGCGGTGGTG
GGTATCCGGCGGAGCACGGAGGATATGGCGCCGGCGACCCGCATAAAAAGGGCATGGGCA
CCGGCGGCGCGGCCAGGGTCTAATTAAGGCGCCGGTGATCGATCTGGGTGTGGTCAGGAC
CTCGGATAATAAGTACTATGTGTGGTGTTAGTGTGTGTCACGTACGGTGTCAATGTGGCC
TAGTACGTAGTAGTGTTGTTGTATGCATACATGTGCGTGTGCGTGTGCGTGTGTGTGTGT
GTGTGCATGGCTGTAGACATGTACATATGCCTAGTGTAGTGGGTGTGGGTGTTCTTTTTT
GGCAGGGACGCTAGGTACTTACTTGCCTACTACGCACTCACACATGGTTTGTTTATACGC
TGTGTCCGGTGAGCAGCTTTGCGATCTACTACTAATCGGATGAATGCTGCCTCATCCCGG
CATTGTCTGCACC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK373439	921	0.0	3 - 920	97	893 / 920	CUST_23645_PI390587928 CUST_23646_PI390587928	ABC03684 ABC03685 ABC03686 ABC03690
AK249250.1	1071	0.0	169 - 720	95	526 / 552	CUST_23645_PI390587928 CUST_23646_PI390587928 CUST_23619_PI390587928	ABC03684 ABC03685 ABC03686 ABC03690
MLOC_66583.1	993	0.0	299 - 846	90	499 / 554	CUST_23645_PI390587928 CUST_23646_PI390587928	ABC03684 ABC03685 ABC03686 ABC03690
MLOC_49699.1	409	0.0	25 - 409	99	384 / 385	CUST_23646_PI390587928 CUST_23645_PI390587928	ABC03684 ABC03685 ABC03686
AK249210.1	988	0.0	151 - 698	90	497 / 554	CUST_23646_PI390587928 CUST_23642_PI390587928 CUST_23645_PI390587928	ABC03684 ABC03685 ABC03686 ABC03690
MLOC_16306.1	437	3e-179	1 - 392	96	377 / 392	CUST_23618_PI390587928	ABC03684 ABC03686
AK377149	518	5e-87	8 - 194	98	183 / 187	CUST_23646_PI390587928 CUST_23645_PI390587928	ABC03684 ABC03685 ABC03686