barSeed - Barley Seed Development Database

Probe ABC03684

Source Contig ABC03684

barSeed

Links

Affymetrix Source Sequence (1099 bp)

>ABC03684 1099
CGTCTAGCTAGCAATCAACCTCCAATCACAACTTGATTTCTTCCAACCCAACCTAGTTAG
TTCTCAGCAGTGAGTGGCAGACACAGAGCTCCGTCTCGATCCATCTCCACCGAATCAAGA
AGATATATCAACAATGGCTGGCGTTGGTCGTAACATGGTGGCGCCGCTGCTGGTGCTGAA
CCTCATCATGTACGTCATCGTCATCGGGTTCGCGAGCTGGAACCTCAACCACTTCATCAA
CGGCCTCACCAACCGCCCCGGCGTAGGCGGCAACGGCGCCACCTTCTACTTCCTCGTCTT
CGCCATCCTGGCCGGCGTCGTCGGCGCAGCATCCAAGCTCGCCGGCGTGCACCACGTGCG
CACCTGGCGCGGCGACAGCCTCGCCACCTCCGCGTCTTCTTCGCTGGTGGCCTGGGCCAT
CACCGCATTGGCGTTCGGGCTGGCGTGCAAGGAGATCCACATCGGCGGCTACCGCGGGTG
GCGCCTCAGGGTGCTGGAGGCGTTCGTCATCATCCTCGCCTTCACGCAGCTGCTCTACGT
GCTTGCTCTCCACTCCGGGCTCTTCGGAAACCAGTTCGGTGACCATGCTGGCGGTGGTGG
GTATCCGGCGGAGCACGGCGGATATGGCGCCGGCGACCACCACAACAAGGGCATGGGCAC
AGGCGGCGTCGCCAGGGTCTAATTAAGGTGCCGGTGATCGATCTGGGCGTGGTCAGTCCA
TAGGATAATAAGTACTATGTGGGGTGTTAGTGTGTGTCACGTACGGTGTCGATGTGGCCT
ACCTAGTAAGTACGTAGTGTTGTTGTTGTATGCATACATGGTGGTGTGCGCGCGTGCGTG
TGTGTGCATGGCTGTAGACATGTACATATGCATAGTGTAGTGGGTGTGGGTGTTCTTTTT
TGGCAGGGACGCTAGGTGGTACTTGCCTACTACGCACTCACACATGGTTTGTTCATATGC
TGTGTCCGGTGAGCAGCTTTGCGATCTACTACTTGCCTAATCGGATGGATGCTTTGCTGC
CTCATCCCGGAATTGTCTGCACCAATTTGCTTGTATGATCAATCAATTGCTTCTTCAGTG
TCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK373439	921	0.0	3 - 920	95	877 / 924	CUST_23645_PI390587928 CUST_23646_PI390587928	ABC03684 ABC03685 ABC03686 ABC03690
AK249250.1	1071	0.0	169 - 720	95	527 / 552	CUST_23645_PI390587928 CUST_23646_PI390587928 CUST_23619_PI390587928	ABC03684 ABC03685 ABC03686 ABC03690
MLOC_66583.1	993	0.0	299 - 846	91	505 / 554	CUST_23646_PI390587928 CUST_23645_PI390587928	ABC03684 ABC03685 ABC03686 ABC03690
AK249210.1	988	0.0	151 - 698	91	503 / 554	CUST_23642_PI390587928 CUST_23646_PI390587928 CUST_23645_PI390587928	ABC03684 ABC03685 ABC03686 ABC03690
MLOC_49699.1	409	0.0	26 - 409	98	377 / 384	CUST_23645_PI390587928 CUST_23646_PI390587928	ABC03684 ABC03685 ABC03686
MLOC_16306.1	437	4e-123	1 - 432	86	387 / 450	CUST_23618_PI390587928	ABC03684 ABC03686
AK377149	518	4e-88	8 - 196	98	185 / 189	CUST_23645_PI390587928 CUST_23646_PI390587928	ABC03684 ABC03685 ABC03686