barSeed - Barley Seed Development Database

Probe ABC03685

Source Contig ABC03685

barSeed

Links

Affymetrix Source Sequence (1037 bp)

>ABC03685 1037
GAGTCATCATACTCCATTCGGTTCGATTCTTGCTTGCACCAAATCCAATCCCACTCCCAC
TCTCATCGCCAATCGAGCGAGTGACACTCCATCCCCATCTCTCTCCCTCTCTGGACCAAC
AACGACAAGAAGAAGAAGAAGAAAGGCAACAGCAATGGCTGGCGTTGGTCGCAACATGGT
GGCGCCGCTGCTGGTGCTGAACCTCATCATGTACGTCATCGTCATCGGGTTCGCGAGCTG
GAACCTCAACCACTTCATCAACGGCCTCACCAACCGCCCCGGCGTCGGCGGCAACGGCGC
CACCTTCTATTTCCTCGTCTTCGCCATCCTCGCCGGCGTCGTCGGCGCCGCATCCAAGCT
CGCCGGAGTGCACCACGTCCGCACCTGGCGCGGGGACAGCCTCGCCACCTCCGCGTCCTC
TTCGCTGGTGGCGTGGGCCATCACCGCATTGGCGTTCGGTCTCGCGTGCAAGGAGATCCA
CATCGGCGGCTACCGCGGGTGGCGGCTCCGGGTGCTGGAGGCGTTCGTCATCATCCTCGC
CTTCACGCAGCTGCTCTACGTGCTTGCTCTCCACTCTGGCCTCTTCGGGAACCAGTTCGG
TAACCATGCTGGCGGTGGTGGGTATCCGGCTGAGCACGGCGGATATGGCGCCGGCGACCC
GCATAACAAGGGCATGGCCACCGGCGGCGTGGCCAGGGTCTGAAGAATCGGATAGATGAT
CTCCCCGTGGCAGCGACGGGTGGATAATAAATTGTACTGTGCTAGTACGTATTTGTGTTA
GTTGTGTCACGTACGTACGGTGTGAGTGTACGTTCTATGCATACATGGCAGTGGGGTGTG
TGTGTGAGCACGGTAGGCATGTACTAGTACTCATGGTTCTTTTTTTTTTTGCGGGTGATA
CTCATGGTTTTTTAGGGACACCAGGTACGTACATACGTACTACTCCCTCCGTTCCTAAAT
ATAAGTTTTTTAAGAGATTTCTAGTGTACTACTCCCCCTTCCTAAATATAAGTCTTTTAA
GAGAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK249250.1	1071	0.0	24 - 1060	99	1027 / 1038	CUST_23619_PI390587928 CUST_23646_PI390587928 CUST_23645_PI390587928	ABC03684 ABC03685 ABC03686 ABC03690
AK373439	921	0.0	65 - 612	96	526 / 549	CUST_23646_PI390587928 CUST_23645_PI390587928	ABC03684 ABC03685 ABC03686 ABC03690
MLOC_66583.1	993	0.0	103 - 846	86	655 / 759	CUST_23646_PI390587928 CUST_23645_PI390587928	ABC03684 ABC03685 ABC03686 ABC03690
AK249210.1	988	0.0	151 - 894	86	652 / 758	CUST_23645_PI390587928 CUST_23646_PI390587928 CUST_23642_PI390587928	ABC03684 ABC03685 ABC03686 ABC03690
AK377149	518	2e-95	4 - 196	99	192 / 193	CUST_23646_PI390587928 CUST_23645_PI390587928	ABC03684 ABC03685 ABC03686
MLOC_23869.1	322	8e-125	1 - 273	97	264 / 273	None	ABC03685
MLOC_49699.1	409	1e-113	157 - 409	96	243 / 253	CUST_23646_PI390587928 CUST_23645_PI390587928	ABC03684 ABC03685 ABC03686