barSeed - Barley Seed Development Database

Probe ABC03650

Source Contig ABC03650

barSeed

Links

Affymetrix Source Sequence (1362 bp)

>ABC03650 1362
CACAATTTTTTTCTCCGCATAAATCATCCTCCGTCACCGGCGGGGTGAGGGAGACGCGGT
CGGCGGGGCGAGACGCCAGAGACAAACCCAACGGAGTTTCCCCCCTGCCGCCGACCCCAA
ACCCTAGCCGCTCCTCCCAGCCCCAGCCGCTCCTACCGACCCCAGCCAGCCGCCGGAATT
CTCCTGGGGGCTCTATTGGCTTTCCTCAAGCCTGTGGCTTCATCGCGGCAGCATGAGCTC
TGCTGGTTCTGCAAGGATTCCAAAGAGGAGACGAACTACCAAGGCGTCGGAGGCTGCAGA
CCGACAACTTCGGGAGCGACAGTTTCCGGACCTGAACTTGCTTCCAGTGGTTGAAGCACT
CAATACTGGGGGTTCACTCTCCATTAATGAGCCTGTCTCACACAGGCAGCCCCCTCCTAT
GGTGGTTAGCCTGGGTTACGAGACCACACAGGTTGTGGTGTCATCTGCTGCTGCAGGGTC
AAACATTGGCATGAATAGTTTCCCCATCAACGTGGAAGTGATTGATGATGATGTTGCGAT
TTATACCTCAGGGCCGCCCCCTCAAGCAAGGCAACAGTCGTCCAGGACAGGACCTATCAC
TGTGATAATAGATGATGATTCTGAAACTACTGCTGGACCAGCAGGGGAAGCTCTTGATGA
GCATGTGAACACTCTGCTGTCTCTGGGAATGAACCCGAGGCACAATCCCTCGAGAGCACA
ACCCAACACTGACCTTGTAATAAACATAGTAGACATACCTGAGACCAACAACACACCGCC
CAAGGTGGCCCAGGCTGCCCCTGAACCTGTGAAGGAGATCCCAAAGGAAACAAAGTTCAG
CTGTCCAGTCTGCATGAATGAGCTGGTCAATGCATCATCGACCATCTGCGGCCACATCTT
CTGCCAGAAGTGCATCAAGGCCTCCATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAG
GAAGTTGACCATAAGCAACTTCCACCGGGTCTACCTCCCGATGGCAGATAATTAAAACTT
ATCCAGCCATTCTTGGAGCATTAGAGCCGATGGCAGATAACTAAAACCTATCCAGCCATT
CTTGGAGCATTAGAGCCGTGGCAGCTGTGACCCTTTTTTGGCACCGGCATTGTGGTGATT
GTATCTGAGCTATTCTTCACAGGGTCATCATGAACAATCAGTTTTCCCCCCCAACAATTT
AACAAGTGCTTGAGACGTGATTACCAATCTGCATACATGGTGCTAGTGGACACCGTTAGT
TAGTTGTTCCTTGTGGAAAGTGGAAACCTAAATTCAGACCGGTATATGTTTGCTGTTCAG
GTATATGTTTTTTTTTCTTCTGCATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_15192.1	2673	0.0	1210 - 2556	100	1347 / 1347	CUST_7647_PI390587928	ABC03650 ABC03651 ABC03652 ABC21572
AK248200.1	1384	0.0	44 - 1366	99	1314 / 1323	None	ABC03650 ABC03651 ABC03652 ABC21572
AK355442	1424	0.0	1 - 1303	99	1292 / 1303	CUST_7647_PI390587928 CUST_32284_PI390587928	ABC03650 ABC03651 ABC03652 ABC21572
AK369368	1309	3e-55	690 - 1034	79	285 / 363	CUST_23279_PI390587928	ABC03650 ABC21572
AK251098.1	1274	3e-51	735 - 939	85	175 / 206	CUST_27156_PI390587928 CUST_7646_PI390587928	ABC03650 ABC03651
MLOC_68145.1	3691	3e-51	326 - 530	85	175 / 206	CUST_27156_PI390587928 CUST_25808_PI390587928 CUST_7646_PI390587928	ABC03650 ABC03651 ABC21572
MLOC_68145.3	3182	3e-51	304 - 508	85	175 / 206	CUST_25808_PI390587928 CUST_7646_PI390587928	ABC03650 ABC03651 ABC21572
MLOC_68145.6	3152	3e-51	270 - 474	85	175 / 206	CUST_25808_PI390587928 CUST_7646_PI390587928	ABC03650 ABC03651 ABC21572
MLOC_68145.5	3145	3e-51	302 - 506	85	175 / 206	CUST_25808_PI390587928 CUST_7646_PI390587928	ABC03650 ABC03651 ABC21572
MLOC_68145.4	3249	3e-51	304 - 508	85	175 / 206	CUST_25808_PI390587928 CUST_7646_PI390587928	ABC03650 ABC03651 ABC21572
MLOC_68145.2	3220	3e-51	326 - 530	85	175 / 206	CUST_27156_PI390587928 CUST_25808_PI390587928 CUST_7646_PI390587928	ABC03650 ABC03651 ABC21572