barSeed - Barley Seed Development Database

Probe ABC02639

Source Contig ABC02639

barSeed

Links

Affymetrix Source Sequence (1262 bp)

>ABC02639 1262
CAGCTTACATCCACAAGTTTGCACACAACACCACCCGAGTCTGAAACTCTGAGAAAGCTC
ATCGTCGCCAATTCACCATGGTTGTTCCGGTGATCGACTTCTCCAAGCTCGACGGCGCCG
AGAGGGCGGAGACCATGGCGCAGATCGCCGACGGCTGCGAGAACTGGGGGTTCTTCCAGC
TGGTGAACCACGGCATCCCGCTGGAGCTTCTTGACCGCGTCAAGAAGGTGTGCTCCGAGA
GCTACCGCCTCCGCGAGGCGGCGTTCCGGTCGTCGAAGCCGGTGCAGACGCTGGAGAGGC
TCGTGGAGGCGGAGCGGCGCGGCGAGGCGGTGGCGCCGGTGGACGACATGGACTGGGAGG
ACATCTTCTACCTCCACGACAACAACCAGTGGCCTTCCGATCCTCCGGCCTTCAAGGAGA
CCATGCGGGAGTACCGCTCCGAGCTCAAGAAGCTCGCGGAGCGGGTCATGGAGGCCATGG
ACGAGAACCTCGGGCTGGACAAGGGACGCATGAAGGCGGCCTTCACCGGCGACGGCCTCC
ACGCGCCATTCTTTGGCACTAAGGTCAGCCACTACCCGCCGTGCCCGCGCCCGGACCTCA
TCACCGGGCTCCGCGCCCACACCGACGCCGGCGGCGTCATCCTGCTGTTCCAGGATGACA
AGGTCGGGGGCCTTGAGGTGCTCAAGGATGGCCAGTGGCTGGACGTGCAGCCGCTCGCCG
ACGCCATCGTGGTCAACACCGGCGACCAGGTGGAGGTGCTCAGCAACGGCCGCTACCGCA
GCGCTTGGCACCGCGTCCTGCCCATGCGCAACGGCAACCGCCGCTCCATCGCCTCCTTCT
ACAACCCGGCGTTCGAGGCAGCCATCTCGCCGGCGGTGGGCGAAGCCGGCGCCGCCGAGT
ACCCGGACTACGTGTTCGGGGATTACATGGACGTGTACAACAAGCAGAAGTTCGAGGCCA
AGGAGCCAAGATTCGAGGCCGTCAAGGCGCCAAAGGCAGCTTAAGATGAATCAAGGAGAT
TGAAGAGACGTATTTATTTATTATCTGGATATATACAACCCTTGTACGGAGTATATTTGA
TCTAAATATATGGACCATCCCACTAGAAAAATTTCAGTGTTTAGTGAGATTGGGACTCCG
GGAGTACATGTGCATCCATTCTTGGGTTCATCATATTCATATATAAGTGCATTTTTGTGA
TAAATAGCGAAAAGATTTGTACTACTCACTACTTTTTGTGTATGTAAAATGCAATCCTTT
GT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK248278.1	1243	0.0	17 - 1243	100	1227 / 1227	CUST_37113_PI390587928	ABC02639 ABC02640 ABC02642 ABC45343
MLOC_43526.1	1431	0.0	61 - 1061	99	992 / 1001	CUST_37114_PI390587928	ABC02639 ABC02640 ABC02642 ABC45343
MLOC_42401.1	463	0.0	1 - 429	99	426 / 429	CUST_37113_PI390587928	ABC02639 ABC02642 ABC45343
MLOC_50024.1	404	0.0	1 - 404	96	387 / 404	None	ABC02639 ABC02642 ABC45343
MLOC_26547.1	594	2e-96	1 - 231	94	218 / 231	None	ABC02639 ABC02642
MLOC_34709.1	1681	3e-95	262 - 1162	74	677 / 911	None	ABC02639
AK369632	1351	3e-70	596 - 1037	78	348 / 446	CUST_37116_PI390587928 CUST_37118_PI390587928	ABC02636 ABC02638 ABC02639 ABC02640 ABC02643 ABC30628 ABC50932
AK359587	1376	3e-70	605 - 1046	78	348 / 446	None	ABC02636 ABC02638 ABC02639 ABC02640 ABC30628 ABC50932
MLOC_54272.1	1455	2e-51	784 - 1081	79	240 / 302	CUST_37135_PI390587928	ABC02636 ABC02638 ABC02639 ABC02640 ABC02642 ABC45343