barSeed - Barley Seed Development Database

Probe ABC02636

Source Contig ABC02636

barSeed

Links

Affymetrix Source Sequence (1313 bp)

>ABC02636 1313
GCACAGCACAGCACACATACAGATATCGAGAGCGATGGCAATTCCTGCTAATGCAGCTGC
CGCCTCGTTGAGCTTCCCGGTGATCAACATGGAGAATCTGGAGACCGAGGAGAGGGGCGC
GGCCATGGAGGTTATCCGCGACGCCTGCGAGAACTGGGGCTTCTTCGAGCTGCTGAACCA
TGGCATCTCGCACGAGCTGATGGACGAGGTGGAACGGGTGAGCAAGGCGCACTACGCGGC
GTGCCAGGAGGAGCAGTTCAAGGAGTTCGCGGCGAGGACGCTGGAGGCCGGCGAGCAAGG
CGCCGACGTGAAGGACGTGGACTGGGAGAGCACCTTCTTCGTCCGCCACCTCCCCGCCTC
CAACCTCGCCAACCTGCCCGACCTCGACCACCACTACAGGCAATTGATGAAGCAGTTCGC
GTCGGAGATCGAGAAGCTGGCGGAGAAGGTGCTGGACCTGCTGTGCCAGAACCTGGGCCT
GGAGCAGGGCTATCTGAAGCGGGCCTTCGCCGGGTCCAAGGGCCCGACGTTCGGCACCAA
GGTCAGTAGCTACCCGCCGTGCCCGCGGCCGGACCTGGTGGACGGCCTCCGCGCGCACAC
CGACGCCGGCGGCGTGATCCTGCTGTTCCAGGACGACCAGGTCAGCGGGCTCCAGCTCCT
CAAGGACGGGGCATGGGTGGACGTGCCGCCCATGCGCCATGCCGTCGTCGTCAACATCGG
CGACCAGCTGGAGGTGATCACCAACGGGCGGTACAAGAGCGTCATGCACCGCGTGCTCAC
CCGCCCCGACGGCAACCGCATGTCCATCGCGTCTTTCTACAACCCCGGCGCAGACGCCGT
CATCTTCCCCGCCCCGGCGCTCGTGGCCGCTGCCGGCGCCGCTGAGAGGAACGAGGGCGA
GGAGGGCACCGCCGTGTACCCGAGGTTCGTGTTCGAGGACTACATGGACCTGTACTTGCG
CCACAAGTTCGAGGCCAAGGAGCCACGGTTCAAGGCCATGAAGGCGGACGCCGCGCCCAT
CGCCACCGCGTGATAAGTGCGTGTGCTCGTACGTGCCAAGGCCGGCCGGGACATGAGTAT
TACGGGACGTGTTGATGTGGTGTACCATAGATATTTGCGTGTGGGTGTGTGTAATGTTGT
CGCTGGTGGCGTCGCAGTGCATGCCGTGATGCTTGTGTGTGTTACCGTACGTGTGAGTGA
AGCTTTCTTCTCTCTTTTGAATAGTACGTGTGATGTTTTAAGTGGTGTACATAGTACTTC
CTCCGTTCCTAAATATAAATCATTTTTAAAGATTTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK372985	1293	0.0	46 - 1293	100	1248 / 1248	None	ABC02636 ABC02638 ABC02640 ABC02642 ABC45343
MLOC_58642.1	1333	0.0	120 - 1333	99	1207 / 1215	None	ABC02636 ABC02638 ABC02640 ABC02642 ABC45343
MLOC_54272.1	1455	0.0	276 - 1284	94	944 / 1009	CUST_37135_PI390587928	ABC02636 ABC02638 ABC02639 ABC02640 ABC02642 ABC45343
AK359587	1376	1e-178	222 - 954	82	614 / 745	None	ABC02636 ABC02638 ABC02639 ABC02640 ABC30628 ABC50932
AK369632	1351	2e-177	207 - 928	83	608 / 736	CUST_37116_PI390587928 CUST_37118_PI390587928	ABC02636 ABC02638 ABC02639 ABC02640 ABC02643 ABC30628 ABC50932