- Probe ABC01658
- Source Contig ABC01658
Affymetrix Source Sequence (1412 bp)
>ABC01658 1412 GCCCAAGCTCTCCAGAGGAGGAGGAGGATCATCCGTCCTCGGGCAGAGAGATGGAGGGCC TGGCGCAGTGGGCCGCGCTGCTGCGGGAGTCGCTGGGCCAGAGCCAGGCGGCCACAGACG CCGTCGTCTCCATCCTCGGCTCCTTCGACAGCCGCCTTTCCGCGCTGACAGCCGCCTCTC CCACTCCTCCGTCCACTGGAACTTGAACCGGAAGCAACCGCCACTCACCAGTGGGATTGT TAACCTGTCTTTGTATGCTCCGAAACGGGCTTAGGACTTCATCCATTCTGCTGCGTTTAT CAGGGCATCTGTCGATGGGAGACTAGTATTTCTACTGACTAGTAAACTCCTTGCAAATTG GGAGATTCTGTGTGCTCTTCGGGCTCCTCGCTCTTCGCTTTCCCGGAAGCATGATATACT AATCCTGAGGACTAAAGAAGTTGAGAAATATAGTGCCATCTCTGGTGGTTTACCTTGCTC AATATATGTGTTAGTATTGAAAGTTGTACATATGAGCAAACCGAGTTTTGTTGAGCTTTG CATTATGCTTTATACCACCCATTAAATATAAAATGTGCCTGCAATGCAAGACATTTTTGT GTATATACGTTTTCTTGTTGCCGGATAGTTCAAATCTTGGCTTTGCTGGATATCTATCTT TGATGTGTTGGAACATTCTGATCTCAATAATCTGTAGGATCCATCATATATTGTTTGTTG TAAATTTGCTAGTTCTATTCCTACTAATGTGTGTGCCGCAAGCAAATCAAATTTACATAA CTTTTTCATGTAGATTTGCAAAGCTGGCTAAATGCCTTTGTTTCATTGTCATTTCGTGTG TAAATTTTGTTCATGACCACTTTGGACCATCTTCTCAAATAGCTCTGCTCTAGAAATAAC CTATAACCCTTTCATTTGCTTAGCTCCCGAGTAGAATTTACAGGTTTGACTGAATTGTGG AGAGGAATGGCGATTCGTTGCTGGTGCAGAGTCAGCAGTTCTTGGAGAAGGTTGCCAAGA CGGTCTCCTTCCTCGCGCAGCCTGAAGGCTCATTCATGCTGTTGCTCACAGTTCAAAAGG ACAGCGCGCTTGAGCTCCTAAACATGCGCCCCTTCTACTTCGTTTACTTATGTGGCGTGA AGACATAAACAAACCTTTGGAGCCATAGTTGTCTTTTTGTCATCTAAAATAATAATGGTA ACATATTAATACAAACAAAATAATATTCTAGCTCAAAAAATTGTATGTGAATAATGAATG GATGCTATGGAACTATATTTGTTATGGAGCTATGTATGTATGGATGCTATGGAACTATAT GGTATATATGGATGTTATGGAATTTTGGATGTATGGATGCTATGGAGTTTTGATATATGG ATCATGAAATTTGTTAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_48154.1 | 770 | 0.0 | 1 - 770 | 96 | 743 / 770 | CUST_2218_PI390587928 | ABC01658 |
| MLOC_48155.1 | 718 | 0.0 | 2 - 715 | 94 | 692 / 734 | CUST_2218_PI390587928 | ABC01658 |
| MLOC_62240.1 | 592 | 0.0 | 4 - 592 | 99 | 584 / 589 | CUST_2218_PI390587928 | ABC01658 ABC13588 |
| MLOC_41621.1 | 659 | 0.0 | 17 - 659 | 96 | 615 / 643 | CUST_2218_PI390587928 | ABC01658 |
| MLOC_41621.2 | 604 | 0.0 | 1 - 604 | 97 | 583 / 604 | CUST_2218_PI390587928 | ABC01658 |
| MLOC_28379.1 | 726 | 0.0 | 1 - 598 | 93 | 575 / 618 | None | ABC01658 |
| AK373035 | 4269 | 0.0 | 3832 - 4269 | 96 | 421 / 439 | CUST_16965_PI390587928 CUST_2201_PI390587928 | ABC01658 ABC01659 ABC01661 ABC13588 ABC38555 ABC39899 ABC49794 |
| MLOC_27032.1 | 625 | 3e-175 | 1 - 433 | 92 | 418 / 454 | None | ABC01658 |
| MLOC_27934.1 | 490 | 4e-174 | 108 - 490 | 96 | 366 / 383 | None | ABC01658 |
| MLOC_28655.2 | 603 | 2e-172 | 1 - 429 | 93 | 399 / 429 | None | ABC01658 |
| MLOC_33154.1 | 363 | 1e-169 | 1 - 363 | 96 | 351 / 364 | None | ABC01658 |
| MLOC_53103.1 | 373 | 3e-160 | 67 - 373 | 100 | 307 / 307 | None | ABC01658 |
| MLOC_28655.1 | 567 | 2e-157 | 1 - 393 | 92 | 380 / 413 | None | ABC01658 |
| AK369280 | 2964 | 1e-153 | 2610 - 2964 | 94 | 337 / 357 | CUST_16965_PI390587928 CUST_16362_PI390587928 | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC40523 ABC49794 |
| MLOC_29719.1 | 357 | 3e-150 | 33 - 357 | 96 | 315 / 327 | None | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC_70086.1 | 308 | 6e-147 | 1 - 308 | 97 | 300 / 308 | CUST_2218_PI390587928 | ABC01658 |
| MLOC_81662.1 | 306 | 2e-142 | 1 - 303 | 97 | 295 / 304 | CUST_5182_PI390587928 CUST_2201_PI390587928 | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC_80725.1 | 282 | 4e-134 | 1 - 282 | 98 | 275 / 282 | CUST_2218_PI390587928 | ABC01658 |
| MLOC_33138.1 | 325 | 1e-129 | 33 - 325 | 95 | 282 / 296 | CUST_2201_PI390587928 | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC_62239.1 | 353 | 7e-127 | 104 - 353 | 99 | 249 / 250 | CUST_2218_PI390587928 | ABC01658 |
| MLOC_46378.1 | 344 | 4e-119 | 1 - 326 | 90 | 312 / 346 | None | ABC01658 |
| MLOC_1994.1 | 284 | 7e-117 | 1 - 251 | 97 | 244 / 251 | CUST_2201_PI390587928 | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC_34026.1 | 1024 | 2e-116 | 104 - 335 | 99 | 231 / 232 | None | ABC01658 |
| MLOC_34026.2 | 932 | 2e-116 | 104 - 335 | 99 | 231 / 232 | None | ABC01658 |
| MLOC_34026.3 | 929 | 2e-116 | 104 - 335 | 99 | 231 / 232 | None | ABC01658 |
| MLOC_3897.1 | 244 | 2e-116 | 1 - 244 | 98 | 240 / 245 | CUST_5182_PI390587928 CUST_2201_PI390587928 | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC_62484.1 | 228 | 9e-101 | 4 - 228 | 96 | 217 / 225 | None | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| AK374635 | 978 | 3e-100 | 764 - 978 | 98 | 210 / 215 | CUST_5182_PI390587928 CUST_2195_PI390587928 | ABC01658 ABC01659 ABC01661 ABC01664 ABC09131 ABC38555 ABC39899 ABC49794 |
| MLOC_53103.2 | 512 | 4e-54 | 67 - 182 | 100 | 116 / 116 | None | ABC01658 |
| MLOC_35490.1 | 224 | 4e-94 | 3 - 218 | 96 | 207 / 216 | None | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC_62623.1 | 219 | 3e-90 | 1 - 216 | 95 | 206 / 217 | None | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC_76678.1 | 185 | 1e-79 | 1 - 184 | 96 | 177 / 184 | None | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC_80450.1 | 176 | 1e-74 | 1 - 176 | 96 | 169 / 176 | CUST_2201_PI390587928 | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC_9491.1 | 171 | 4e-74 | 5 - 171 | 97 | 162 / 167 | None | ABC01658 ABC13588 |
| MLOC_65961.1 | 208 | 5e-73 | 3 - 183 | 94 | 171 / 181 | None | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC_24765.1 | 259 | 9e-71 | 84 - 259 | 94 | 166 / 176 | None | ABC01658 |
| MLOC_43792.1 | 243 | 4e-64 | 73 - 234 | 94 | 153 / 162 | None | ABC01658 |
| MLOC_26582.1 | 394 | 4e-64 | 258 - 394 | 99 | 136 / 137 | CUST_5182_PI390587928 | ABC01658 ABC01659 ABC01661 ABC38555 ABC39899 ABC49794 |
| MLOC_42427.1 | 231 | 2e-58 | 20 - 190 | 91 | 158 / 174 | None | ABC01658 |
| MLOC_27861.1 | 319 | 2e-58 | 74 - 244 | 91 | 158 / 174 | None | ABC01658 |
| MLOC_59043.1 | 124 | 2e-53 | 4 - 124 | 98 | 120 / 122 | CUST_2201_PI390587928 | ABC01658 ABC39899 ABC49794 |