barSeed - Barley Seed Development Database

Probe ABC01557

Source Contig ABC01557

barSeed

Links

Affymetrix Source Sequence (640 bp)

>ABC01557 640
GTCCCCGTCTACGCCGCAGCAGCCGCCTCCTGCTACTCGCCGCCGAGATGACGAAGCGCA
CCAAGAAGGCTGGAATCGTCGGGAAGTATGGTATGCGCTTGTAACATTTGACTCTTTTCC
CTGTTCATGTGGTTCTGCTATTTTCTGAAATTAGCCCTTGCAATGTTATAGGAACCAGGT
ATGGTGCCAGTCTGCGTAAGCAGATCAAGAAGATGGAGGTGTCTCAGCACTCCAAGTACT
TCTGTGAATTCTGCGGGAAGTTTGCTGTGAAGAGGAAAGCTGTTGGAATTTGGGGATGCA
AGGACTGTGGGAAGGTCAAGGCTGGTGGTGCCTATACCATGAACACGGCTAGTGCGGTCA
CCGTCAGGAGCACCATCCGCCGTTTGAGGGAGCAGACCGAAGCTTGATCGCACTACTACT
GTTATCTTGAGGAATTCAGTAGTTCTGTAGTGGAATTAAAGACTTCAAATATCTGTATTT
TGGCTATTCAGCAACGGATATCTGTTAGTAATTTTGTCTTCTGATTTTAGGATCTTTGAA
ACCTGGAGGCATGTCCCTACAGTTGCCTGTTATGCTTTATGTCATCCTGTTTCTATTTGT
GATGCCATTGTTACTTCCAAAANAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_56911.1	593	0.0	1 - 380	99	380 / 381	None	ABC01547 ABC01549 ABC01555 ABC01556 ABC01557
MLOC_62908.1	624	4e-86	233 - 456	92	207 / 224	CUST_9041_PI390587928	ABC01547 ABC01549 ABC01555 ABC01556 ABC01557
AK371024	568	1e-85	145 - 389	90	221 / 245	None	ABC01547 ABC01549 ABC01555 ABC01556 ABC01557
MLOC_38730.1	500	1e-85	166 - 410	90	221 / 245	None	ABC01547 ABC01549 ABC01555 ABC01556 ABC01557