barSeed - Barley Seed Development Database

Probe ABC01547

Source Contig ABC01547

barSeed

Links

Affymetrix Source Sequence (756 bp)

>ABC01547 756
CGCAGCTCGCCCCCGTCTCCCGGATTTCGCCGCCGCCGCCGCTCGCCGCCCACGCTTCCT
ACCCGCCGACGAGATGACGAAGCGTACCAAGAAAGCTGGAATTGTCGGCAAATATGGTAC
ACGTTATGGTGCCAGTCTGCGTAAGCAGATCAAGAAGATGGAGGTGTCTCAGCACTCAAA
GTACTTCTGTGAGTTCTGTGGGAAGTTTGCTGTGAAGAGGAAAGCAGTTGGAATTTGGGG
ATGCAAGGACTGTGGGAAGGTGAAGGCTGGCGGTGCTTACACCATGAACACTGCCAGCGC
GGTCACTGTCAGGAGCACTATCCGTCGCTTGAGGGAACAGACTGAAGCATAAGTTGTTAC
TAGTGTTTTGTCCTAGTGAATCATCTGGGATTTTGCAGTTTAGACGATACTTTGGATTCA
GTTCCGTTGCCTGTTTAGTCAAGGATATCTTTGTACTTGGTGCCATGGATGTTCTGTTAT
GTTATTCTTCCACCCTTTTGTAAAAAAAAAAATGATTCCACTGGTTTACTGTGGATTCTG
TTTTGCCTTCTGCAGTCCATGCTGTCTTCACGGTTAGGTATCGAACTCAGCTCTTAAGAT
TTGCACGAGCGAAATGTAGCCCACCTTCTCAAACTAGGACTTCCAGTTGGTTGGTTGTTC
CCTTTTGTATGATGAACTGCATGCTTCTCTGGGCTTGTAGCAACTCTAGCAGATCGTATA
AAACCTTGCAGGTTCTTATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_62908.1	624	0.0	1 - 590	96	575 / 597	CUST_9041_PI390587928	ABC01547 ABC01549 ABC01555 ABC01556 ABC01557
AK371024	568	1e-106	61 - 378	89	282 / 318	None	ABC01547 ABC01549 ABC01555 ABC01556 ABC01557
MLOC_38730.1	500	1e-106	177 - 494	89	282 / 318	None	ABC01547 ABC01549 ABC01555 ABC01556 ABC01557
MLOC_56911.1	593	2e-104	145 - 434	90	262 / 290	None	ABC01547 ABC01549 ABC01555 ABC01556 ABC01557