barSeed - Barley Seed Development Database

Probe ABC01555

Source Contig ABC01555

barSeed

Links

Affymetrix Source Sequence (678 bp)

>ABC01555 678
AGGCGCCGCCGCCGTCTCCCTCCCCTCTTTGCCGCCGCCGCCGCCACCGCCGCCGCCGCC
AGTTGCCGCGGACGCCTCCTCCTCGCCGGCGACATGACGAAGCGCACCAAGAAGGCTGGA
ATCGTTGGCAAATATGGTACCAGGTACGGTGCCAGTCTGCGTAAGCAGATCAAGAAGATG
GAGGTCTCCCAGCACTCCAAGTACTTCTGTGAGTTCTGTGGCAAGTTTGCCGTGAAGAGG
AAAGCAGTTGGAATCTGGGGATGCAAGGACTGCGGCAAGGTTAAGGCCGGCGGTGCCTAC
ACCATGAACACTGCAAGTGCGGTCACCGTCAGGAGCACCATCCGTCGCCTGAGGGAGCAG
ACTGAGGCTTGATCGCGGCCAATTTGACAAAGGAGCCTGTGGATTTTGTAGTTGAGACGG
GACTCATTCGACGCCATGTAGCTAAATTGACAACATACAATGTTATTTACCGGCTTGTTG
GGTTCTGAAAGTATCCGGCTACATTACGTTGTGTATCTTGTTTTTGGCTTATTTGATCGT
CTGACGGTACTCTTTAAAAAAAAGCCGTGTTGGTTCTTGAATCTTGATATTATTGTCATC
TCCCACTGGATGAAACTAACAGGAAGGGCTAAATGAGTGTCTAGATTTGATTTTGCGGTN
NAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK371024	568	0.0	16 - 568	99	552 / 553	None	ABC01547 ABC01549 ABC01555 ABC01556 ABC01557
MLOC_38730.1	500	0.0	1 - 500	99	498 / 500	None	ABC01547 ABC01549 ABC01555 ABC01556 ABC01557
MLOC_62908.1	624	5e-110	236 - 563	89	291 / 328	CUST_9041_PI390587928	ABC01547 ABC01549 ABC01555 ABC01556 ABC01557
MLOC_56911.1	593	9e-108	137 - 443	90	276 / 307	None	ABC01547 ABC01549 ABC01555 ABC01556 ABC01557