- Probe ABC01424
- Source Contig ABC01424
Affymetrix Source Sequence (2676 bp)
>ABC01424 2676 CCGCCATCCTCCTCTGCCTCCCACTCTATCGTCTTCCTCCTCATCTCCGGCGCCACTCCG CCGCCCCTCGACTCCTCCAAGGACCAACGAAAGATGGCGTCCCATATTGTTGGGTACCCT CGCATGGGCCCCAAGAGGGAGCTCAAGTTTGCCTTGGAGTCTTTCTGGGATGGGAAGAGC AGCGCTGAGGATCTGGAGAAGGTTGCCACCGACCTCAGGGCCAGCATCTGGAAGCAGATG TCAGAGGCTGGGATCAAGTACATTCCCAGCAACACCTTCTCATACTATGACCAGGTGCTT GACACAACGGCCATGCTTGGTGCTGTCCCGGACCGCTACTCATGGACTGGCGGAGAGATT GGCCACAGCACCTACTTCTCAATGGCCAGGGGCAATGCCACTGTCCCTGCTATGGAGATG ACCAAGTGGTTTGACACCAACTACCACTTCATTGTACCTGAATTGAGCCCAGCAACCAAG TTCTCATATGCTTCACACAAGGCTGTCTCTGAATACAAGGAGGCAAAGGCGCTTGGTGTT GACACGGTTCCAGTGCTTGTTGGACCAGTCTCATACTTGCTGCTCTCTAAGGCGGCGAAG GGTGTGGAGAAATCATTCTCTCTTCTTTCACTTCTTGATAGCATTCTTCCCATCTACAAG GAGGTTGTGGCTGAGCTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGATGAGCCCACC CTTGTTAAGGACCTTGCTGCTCATGAATTGGCCGCGTTCTCTTCAGCATATGCTGAACTT GAATCAGCACTCTCTGGATTGAATGTCCTTATTGAGACATACTTTGCCGATGTTCCTGCT GAATCTTACAAGACCCTCACATCATTGAGTGGCGTGACTGCCTATGGTTTTGATCTTGTT CGTGGAACTAAGACAGTTGAGCTTATCAAGAGCACGGGTATCCCATCTGGGAAGTACCTA TTTGCTGGTGTTGTAGATGGACGGAACATTTGGGCTGATGATCTTGCTGCATCTCTCAGC ACTCTTCAGTCTCTTGAGTCTGTTGTTGGCAAGGACAAACTTGTGGTGTCTACCTCCTGC TCACTGATGCACACTGCTGTTGATCTTGTGAACGAGACCAAGCTCGACAGTGAGATCAAG TCATGGCTCGCATTTGCTGCCCAAAAGGTGGTTGAGGTGAATGCCCTTGGCAAGGCTTTG GCTGGTCAAAAGGATGAGGCCTACTTTGCGGCCAATGCCGCTGCTCAGGCCTCAAGGAGG TCGTCACCCAGGGTGAACAATGAGGAGGTTCAGAAGGCTGCGGCTGCTTTGAAGGGATCT GACCACCGCCGTGCTACCCCTGTTTCTGCTAGACTGGATGCTCAGCAGAAGAAGCTCAAC CTTCCTGTCCTTCCGACAACGACAATTGGTTCATTCCCTCAGACAATGGACCTCAGGAGG GTCCGCCGTGAGTACAAGGCGAAGAAGATCTCTGAGGAGGACTATGTCAGTGCTATCAAG GAAGAAATTAGCAAGGTTGTCAAGATCCAAGAGGAGCTTGACATCGATGTGCTCGTCCAT GGAGAGCCTGAGAGAAATGACATGGTTGAGTACTTTGGCGAGCAACTATCTGGTTTTGCA TTTACTGCCAATGGATGGGTGCAATCCTATGGATCACGTTGCGTGAAGCCACCGATCATC TATGGTGATGTCAGCCGCCCCAACCCCATGACTGTCTTCTGGTCCAAGATGGCTCAGAGC ATGACCCCTCGCCCAATGAAGGGAATGTTGACTGGCCCAGTCACAATCCTCAACTGGTCT TTTGTCAGGAACGACCAGCCAAGGTTTGAGACATGCTACCAGATTGCTCTTGCCATTAAA AAGGAGGTTGAGGATCTTGAAGCTGGTGGTATTCAGGTGATCCAGATCGACGAGGCTGCT CTAAGAGAGGGTCTGCCACTGCGCAAGTCGGAGCATGCTTTCTACCTGGACTGGGCCGTC CACTCGTTCAGAATCACCAACTGCGGTGTGCAAGATACCACTCAGATCCACACCCACATG TGCTACTCCAACTTCAACGATATCATCCACTCCATCATCAACATGGACGCCGACGTCATC ACCATTGAGAACTCACGCTCCGACGAGAAGCTCCTCTCGGTCTTCCGCGAGGGCGTGACC TACGGGGCCGGCATTGGCCCCGGCGTCTACGACATCCACTCCCCCAGGATCCCCTCCACG GAGGAGATTGCCGACCGCGTCAACAAGATGCTCGCGGTGCTCGACACCAACATCCTCTGG GTGAACCCTGACTGCGGCCTCAAGACCCGCAAGTACACCGAGGTGAAGCCCGCCCTGACT AACATGGTCGCTGCGGCCAAGCTCATCCGCACCCAGCTCGCCAGCACGAAGTGAGGAGCC ATGAAATCGAACAGCCTGATGATACTACTACCTATTGTTTTGTGGGGACAGAGCGCCAAA CGAGCCGTTTGTTTCGAATAATCCGATTCTTTATCGTACCGCCCGAGTCTGGCTAGGGTT AGTCCTGCTGTTATGGTAAAACTGTTACATGTTGATGGCATACGTTGTATTCTATGTGTT TGGTGGGTGGTCTCATTGTTTACAGGTTGTGTGGTCTTGTCGCGGTTATAAACAGAGTTG AATGAAAATTGTTCTGCAAAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_53175.2 | 2765 | 0.0 | 25 - 2682 | 99 | 2649 / 2658 | CUST_3740_PI390587928 CUST_34392_PI390587928 | ABC01424 |
| MLOC_53175.4 | 2196 | 0.0 | 1 - 2103 | 99 | 2095 / 2103 | None | ABC01424 |
| MLOC_53175.6 | 2016 | 0.0 | 1 - 1923 | 99 | 1913 / 1923 | None | ABC01424 |
| MLOC_53175.5 | 2017 | 0.0 | 1 - 1924 | 99 | 1913 / 1924 | None | ABC01424 |
| MLOC_53175.3 | 2758 | 0.0 | 1 - 769 | 99 | 767 / 769 | None | ABC01424 |
| MLOC_76000.1 | 3444 | 0.0 | 940 - 3231 | 87 | 2001 / 2295 | CUST_3739_PI390587928 | ABC01424 |
| MLOC_76000.3 | 3082 | 0.0 | 546 - 2836 | 87 | 2000 / 2294 | CUST_31196_PI390587928 CUST_3739_PI390587928 | ABC01424 |
| MLOC_76000.2 | 2306 | 0.0 | 222 - 2306 | 87 | 1812 / 2088 | None | ABC01424 |
| MLOC_76000.6 | 2261 | 0.0 | 165 - 2261 | 87 | 1818 / 2100 | None | ABC01424 |
| MLOC_76000.7 | 2070 | 0.0 | 29 - 1834 | 87 | 1565 / 1809 | None | ABC01424 |
| MLOC_76000.8 | 2705 | 3e-178 | 1970 - 2459 | 90 | 440 / 490 | CUST_31196_PI390587928 CUST_3739_PI390587928 | ABC01424 |
| AK369194 | 2582 | 0.0 | 12 - 1432 | 86 | 1220 / 1424 | None | ABC01424 |
| MLOC_76000.4 | 2222 | 0.0 | 1348 - 2222 | 88 | 771 / 875 | None | ABC01424 |
| MLOC_53175.1 | 4997 | 1e-61 | 3697 - 3826 | 100 | 130 / 130 | CUST_34392_PI390587928 CUST_3740_PI390587928 | ABC01424 |
| MLOC_76000.5 | 410 | 1e-117 | 57 - 410 | 88 | 313 / 354 | None | ABC01424 |