barSeed - Barley Seed Development Database

Probe ABC01327

Source Contig ABC01327

barSeed

Links

Affymetrix Source Sequence (992 bp)

>ABC01327 992
GGCACCAGGAACGCTCCCGGCCCCTTCCTCCCTCCCTCCCTCTCCCTCCCCCGCTCTCGC
GTCCGCGCTCGCTCGCTCGCTCGCTAGCCGCCTCCGTCGGTCCACCGGGCCACCGCACCG
CGGCGGCATGGCGGATCAGCTCACCGACGACCAGATCGCCGAGTTCAAGGAGGCCTTCAG
CCTCTTCGACAAGGACGGAGATGGTTGCATCACCACCAAGGAGCTGGGAACAGTCATGCG
CTCGCTGGGGCAGAACCCAACGGAGGCTGAGCTCCAGGACATGATCAATGAAGTCGACGC
TGATGGCAACGGCACCATTGACTTCCCAGAGTTCCTCAACCTGATGGCCCGCAAGATGAA
GGACACTGACTCAGAGGAGGAGCTCAAGGAGGCCTTCAGGGTGTTCGACAAGGACCAAAA
CGGCTTCATCTCTGCTGCTGAGCTCCGCCACGTCATGACGAATCTCGGCGAGAAGCTCAC
CGACGAGGAGGTGGACGAGATGATCCGTGAAGCTGACGTCGACGGTGATGGCCAGATCAA
CTACGAGGAGTTCGTCAAGGTCATGATGGCCAAATGAGCGCCGAATCGTGCTCCGAAGAC
AGGAGGAGAATTGTGCATTGCATATTAGTTTAAGACGAAACTCTTATTTGATCGATTTCC
AGTTAAGCATCCTACCTAGCTGTAGCTGCTAAAACGGATCGCACGACGCAATTCCTGCTA
TGCTCTCCAGTGTGTTTCCAGACCTCTTGTGTTTTATGTGAACTTGTGTCCTCCCTGGTG
TATCCTGATTGCTGTTGGGCCCGTCTGTAGTATATTTTCTCATCAACTTCTGCTTCGCTC
TTCTATCTAGTATCAATGGAAAGCCGGTGTTTCGTAAAAAAAAAAAAAAAAATTAGATGT
TATCCTGTGCTTCGGTATGCGTTTTTGCGTGTGAACGGCAGATAAAGATACATTTGATGT
ATGTGATGCTGGATGAAATTTGAAATTTGAAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK368424	825	0.0	10 - 825	100	816 / 816	CUST_33281_PI390587928	ABC01321 ABC01323 ABC01327 ABC01328 ABC01330 ABC01336 ABC01338 ABC01339 ABC01340
MLOC_34485.3	831	0.0	37 - 826	98	777 / 790	CUST_35466_PI390587928 CUST_33281_PI390587928	ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340
MLOC_34485.1	1777	0.0	878 - 1667	98	777 / 790	CUST_35466_PI390587928 CUST_33281_PI390587928	ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340
MLOC_34485.2	808	0.0	217 - 808	100	592 / 592	CUST_33281_PI390587928	ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340
MLOC_19924.1	898	7e-165	250 - 696	90	403 / 447	None	ABC01321 ABC01323 ABC01327 ABC01328 ABC01330 ABC01340
AK368252	855	3e-164	92 - 543	90	406 / 452	CUST_35486_PI390587928	ABC01321 ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340 ABC47049
AK372146	811	1e-147	110 - 561	88	396 / 452	CUST_35489_PI390587928	ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340
MLOC_58454.2	644	2e-146	72 - 528	87	399 / 457	None	ABC01321 ABC01323 ABC01327 ABC01328 ABC01330 ABC01336 ABC01338 ABC01339 ABC47433
MLOC_58454.1	855	2e-146	193 - 649	87	399 / 457	CUST_35522_PI390587928	ABC01321 ABC01323 ABC01327 ABC01328 ABC01330 ABC01336 ABC01338 ABC01339 ABC47433
AK251556.1	850	1e-132	129 - 574	86	383 / 446	CUST_35495_PI390587928	ABC01321 ABC01327 ABC01330 ABC35072
MLOC_36991.3	661	1e-128	111 - 486	89	334 / 376	None	ABC01321 ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340
MLOC_36991.1	2209	1e-128	1407 - 1782	89	334 / 376	CUST_35486_PI390587928	ABC01321 ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340 ABC47049
MLOC_36991.2	1148	4e-128	564 - 938	89	333 / 375	CUST_35486_PI390587928	ABC01321 ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340 ABC47049
MLOC_19561.2	1004	1e-118	309 - 684	87	328 / 376	CUST_35497_PI390587928 CUST_35489_PI390587928	ABC01321 ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340
MLOC_19561.1	981	1e-117	303 - 673	87	324 / 371	None	ABC01321 ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340
MLOC_42810.1	634	3e-99	203 - 399	100	197 / 197	None	ABC01327 ABC01338