barSeed - Barley Seed Development Database

Probe ABC01321

Source Contig ABC01321

barSeed

Links

Affymetrix Source Sequence (915 bp)

>ABC01321 915
GGCCCCCCCTCCTTCCTCCTCTCCCCCGCCCGTACGGTCAAACAAGAGACCCCCCACCCC
CCTCTCTCCTCCACCTCCAGTGCTCGCCGCGAGAAGCCGAGAAGGAAGAGCCTGAGAAGG
TTGCATCATGGCGGACCAACTCACCGACGACCAGATCGCCGAGTTCAAGGAAGCCTTCAG
CCTATTCGACAAGGACGGCGACGGTTGCATCACAACTAAGGAGCTGGGAACAGTCATGCG
TTCGCTGGGGCAGAACCCAACGGAGGCAGAGCTCCAGGACATGATCAACGAGGTGGATGC
AGACGGCAACGGCACTATCGACTTCCCGGAATTCCTCAACCTGATGGCTCGCAAGATGAA
GGACACCGACTCGGAGGAAGAGCTCAAGGAGGCTTTCCGGGTGTTCGATAAGGACCAGAA
CGGCTTCATCTCGGCCGCGGAGCTCCGCCACGTCATGACCAACCTCGGCGAGAAGCTAAC
GGACGAGGAGGTGGACGAGATGATCCGCGAGGCCGATGTCGACGGCGACGGGCAGATCAA
CTACGAGGAGTTCGTTAAGGTGATGATGGCCAAGTAATCCCGCCGATGTGCCGGTGGACG
GTGGTATTATTATTTACCGGGGAGGAGGAAATTGTGCTATGCATATTAGTAGTAAGGAAT
GCGGCTCTCGTTTCCTTGTCTTTGCCCCGAACCAGAAGAAGCGTACTAGTAGACGTAGTT
GCTGAAGAACATTCATGGAATCCTCCTCCCCTCCTGCTACCCTGTCTCTCTCCCGTGTGT
CATTGAAACATCTTTCTTTCTGTGTGAATCTGCAACACTTGGCCCCTTCGTGATGAACCC
TGATTGCAGTTGAATCCGTTTGATTCAAGTTCAGTTATACTCGGCCAGCGGTTTTTTCAA
AAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_19924.1	898	0.0	124 - 898	100	775 / 775	None	ABC01321 ABC01323 ABC01327 ABC01328 ABC01330 ABC01340
AK368424	825	7e-165	128 - 574	90	403 / 447	CUST_33281_PI390587928	ABC01321 ABC01323 ABC01327 ABC01328 ABC01330 ABC01336 ABC01338 ABC01339 ABC01340
AK368252	855	2e-164	92 - 540	90	404 / 449	CUST_35486_PI390587928	ABC01321 ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340 ABC47049
MLOC_58454.2	644	5e-141	72 - 520	87	390 / 449	None	ABC01321 ABC01323 ABC01327 ABC01328 ABC01330 ABC01336 ABC01338 ABC01339 ABC47433
MLOC_58454.1	855	5e-141	193 - 641	87	390 / 449	CUST_35522_PI390587928	ABC01321 ABC01323 ABC01327 ABC01328 ABC01330 ABC01336 ABC01338 ABC01339 ABC47433
AK251556.1	850	3e-133	129 - 578	86	386 / 450	CUST_35495_PI390587928	ABC01321 ABC01327 ABC01330 ABC35072
MLOC_36991.3	661	1e-132	110 - 483	90	335 / 374	None	ABC01321 ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340
MLOC_36991.1	2209	4e-132	1407 - 1779	90	334 / 373	CUST_35486_PI390587928	ABC01321 ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340 ABC47049
MLOC_36991.2	1148	1e-131	564 - 935	90	333 / 372	CUST_35486_PI390587928	ABC01321 ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340 ABC47049
MLOC_19561.2	1004	4e-122	312 - 684	88	328 / 373	CUST_35497_PI390587928 CUST_35489_PI390587928	ABC01321 ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340
MLOC_19561.1	981	2e-121	302 - 673	88	327 / 372	None	ABC01321 ABC01323 ABC01327 ABC01328 ABC01336 ABC01338 ABC01339 ABC01340