barSeed - Barley Seed Development Database

Probe ABC01308

Source Contig ABC01308

barSeed

Links

Affymetrix Source Sequence (798 bp)

>ABC01308 798
GTGATCGGATCAGACTTCGAACTCTTTAGCCTGAAGAAGTCACAGAGAAAACAGTCGAGT
GCAACTGCAAGATGGTGAAGCTTGCGTTTGGAAGCTTCGGCGACTCGTTCAGCGCCACGT
CCATCAGGTCCTATGTCGCGGAGTTCATCGCCACCCTCCTCTTCGTGTTCGCCGGCGTCG
GGTCCGCCATTTCCTACGGGCAACTGACGCAGGGTGGCGCACTGGACCCGGCTGGCCTTG
TGGCGATCGCCATCGCCCATGCCTTCGCCCTCTTCGTCGGCGTGGCGATGGCTGCCAACA
TCTCCGGCGGCCACCTGAACCCCGCCGTCACGTTCGGCCTCGCCGTCGGCGGCCACGTCA
CCATCCTCACCGGGCTCTTCTACTGGGTCGCCCAGCTGCTCGGCGCCTCCGTGGCATGCC
TCCTCCTGCAGTTTGTCACCCACGCCCAGGCTATGCCGACGCACGCCGTGTCCGGCATCA
GCGAGGTCGAGGGCGTGGTGATGGAGATCGTGATCACCTTCGCGCTGGTGTACACGGTGT
ACGCGACGGCGGCCGACCCCAAGAAGGGCTCCCTCGGCACCATCGCGCCCATGGCGATCG
GCTTCATCGTCGGCGCCAACATCCTCGCCGCCGGGCCCTTCAGCGGCGGCTCCATGAACC
CGGCGCGCTCCTTCGGGCCGGCCGTGGCGGCCGGCAACTTCTCCGGCCACTGGGTGTACC
GGGTCGGGCCACTCATTGGTGGCGGCCTCGCCGGGCTCGTCTACGGCGACGTGTTCATCG
CCTCCTACCAGCCGGTCG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_55629.1	1084	0.0	109 - 906	99	796 / 798	CUST_30773_PI390587928	ABC01308 ABC01310
AK363660	979	0.0	15 - 812	99	792 / 798	CUST_30773_PI390587928	ABC01308 ABC01310
AK250814.1	1403	0.0	85 - 814	88	643 / 730	None	ABC01308 ABC01310
MLOC_66094.1	1063	0.0	158 - 887	88	643 / 730	None	ABC01308 ABC01310
MLOC_66094.2	909	5e-126	4 - 358	90	319 / 355	None	ABC01308 ABC01310
MLOC_66094.3	452	4e-117	9 - 381	87	325 / 373	None	ABC01308 ABC01310
MLOC_73301.3	1632	7e-75	264 - 893	75	489 / 648	CUST_30766_PI390587928 CUST_32985_PI390587928 CUST_30763_PI390587928 CUST_4427_PI390587928	ABC01308 ABC01309 ABC36917 ABC37234
MLOC_73301.1	1909	2e-70	490 - 991	77	393 / 512	CUST_30771_PI390587928 CUST_30763_PI390587928 CUST_4427_PI390587928 CUST_30766_PI390587928 CUST_32985_PI390587928 CUST_30762_PI390587928 CUST_30768_PI390587928	ABC01308 ABC01309 ABC36917 ABC37234