barSeed - Barley Seed Development Database

Probe ABC01285

Source Contig ABC01285

barSeed

Links

Affymetrix Source Sequence (1024 bp)

>ABC01285 1024
AGGCATTGGGCTGGCCTTCATGGCTGCTGCCAAGGGTTACAGACTTGTACTCACAATGCC
CGCCTCCATGAGTATGGAGAGGAGAATCATCCTGAAGGCTTTTGGTGCTGAGCTGATCCT
CACAGACCCACTTTTGGGAATGAAAGGAGTTGTCCAAAAGTCCTAAGAGCTGGCAATAAA
GACACCCAATTCATACATCCTTCAGCAATTCGAGAATCCTGCTAACCCAAAGATTCGCTA
TGAGACAACCGGACCTGAAATCTGGAAAGGCACAGGAGGAAAGATCGATGCCCTTGTTTC
TGGCATTGGGACAGGTGGTACCATTACTGGATCTGGAAAATACCTCAAAGAGCAAAATCC
TAATATCAAGCTCTACGGCGTGGAGCCTACCGAGAGTGCTGTCTTAAATGGTGGAAAGCC
TGGACCACACAAGATCCAAGGAATTGGAGCTGGTTTCATCCCTGGTGTCTTGGATGTTGA
CATCATTGATGAAACCGTACAGGTTTCAAGTGATGAGTCCATTGAGATGGCAAAGTCTCT
TGCATTGAAAGAAGGGTTGCTGGTTGGGATCTCTTCTGGTGCGGCTGCAGCTGCGGCAAT
CAAGGTTGCTCAGAGGCCTGAAAATGCAGGGAAACTCTTTGTTGTTGTATTCCCAAGCTT
CGGAGAGCGCTACCTTTCGTCGGTGCTCTTCCACTCTATCAAGAAGGAGGCCGAGAGCAT
GGTGGTGGAGTGATCCCCGAGACTCCTCAAGCGCGCAAAGCTGTTTTCCGAAGTCAAATC
CCTCCGTTCATAGGAGCCCCTCTACAGAAATAAAAGCTTTTGGTGTCCCTGCTAGTGTTG
GTCTGACATTTAAGCCCTTGCAAGTTTGAGTCCCACTTTGTGTAGCAAATGGGGAATACT
CTGTGTTGGCCTTCTGGCGTTTAGCGATTTGAATTAAGTCTGCCCTGTATATTTGAATTC
CATGTGTCAGCCAGTGTGAAATAAAGCATCATGGTGCCTTACATGTCAAAAAAAAAAAAA
AAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK248898.1	1359	0.0	346 - 1356	97	990 / 1022	None	ABC01285 ABC01291 ABC01302
MLOC_22001.1	1497	0.0	500 - 1497	97	977 / 1005	None	ABC01285 ABC01291 ABC01302
MLOC_50491.2	533	1e-173	19 - 388	96	357 / 370	None	ABC01285 ABC01302
MLOC_50491.1	555	1e-173	19 - 388	96	357 / 370	None	ABC01285 ABC01302
MLOC_73321.1	149	2e-70	1 - 148	99	147 / 148	None	ABC01285
AK358922	2032	1e-67	1795 - 1940	99	144 / 146	CUST_8982_PI390587928	ABC01285 ABC01287 ABC01302 ABC02379
AK354728	2811	1e-67	1856 - 2001	99	144 / 146	CUST_37287_PI390587928 CUST_38102_PI390587928 CUST_8982_PI390587928	ABC01285 ABC01287 ABC01302 ABC02379
MLOC_35880.1	171	1e-67	19 - 167	98	146 / 149	None	ABC01285 ABC01302
MLOC_9250.3	722	1e-67	314 - 459	99	144 / 146	None	ABC01285 ABC01302
MLOC_9250.1	1486	1e-67	851 - 996	99	144 / 146	CUST_34958_PI390587928 CUST_37287_PI390587928 CUST_38102_PI390587928	ABC01285 ABC01302
MLOC_9250.2	1258	1e-67	851 - 996	99	144 / 146	CUST_34958_PI390587928	ABC01285 ABC01302