barSeed - Barley Seed Development Database

Probe ABC00650

Source Contig ABC00650

barSeed

Links

Affymetrix Source Sequence (863 bp)

>ABC00650 863
CTTTGCACTTGATCACCTTGCCGGCCGTCGCCATCTTTCTCTGTCGCTTCGCGTCGCCTT
GAATCGAAAAATTCTGTGAGCCCGGAATCGAAATCGAGAGCTGGCGGCGGATTAGGGTTT
CATTTGCGTCCGTTCTCAACGTCAGCAGGAGCGAGCGGGAACTCCGGCCATGGCGCCGTC
GCAGCCCAAGTCAGGGCTCTTCGTGGGCATCAACAAGGGCCACGTCATCACCAAGCGCGA
GCTGCCGCCCCGCCCGTCCGACCGCAAGGGGAAAGGCACAAAGAGGGTGCATTTTGTCAG
GAACTTGATCAGGGAGGTTGCTGGATTCGCTCCATATGAGAAACGCATCACTGAGCTTCT
TAAGGTTGGAAAGGACAAGCGTGCACTCAAGGTCGCCAAGAGAAAGCTTGGTACTCACAA
GAGAGCAAAGAAGAAGAGAGAGGAGATGTCAAGTGTCCTGAGGAAGATGAGGTCTGCTGG
TGGTGGTGGTGCTGGTGACAAGAAGAAATAGAACTTTGCCAGTCGTCAATTTTATCGCAA
AACTCTGTCCTGTCCTGTATTACCAGTCGGTACCTATAGAGCTATGGCCGTTGTGGATTG
TGGAACTACTAAATTTGTGACACTCTCTAAGCCTGCGGTTTCTGTTTTGAGAAGACCAAT
CTTTTTAAGATTTTTACATGAGTTTGGCGCCTTTGTTTTATTATTAAAAAAAAAAAAAAT
GATTACTTGATACTCAGCTGTTTATTCAGTTATGTAGCTTGTCTGGGTTTTGTACCTGTG
ATTGTTGCTGCGTTTTGAACATGGATCCCATAACCCCATTACAGCATCCATTTCAGGCAT
AAACTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_75942.1	1365	0.0	194 - 942	98	731 / 749	CUST_22100_PI390587928	ABC00043 ABC00067 ABC00650 ABC52628
MLOC_75942.2	1165	0.0	51 - 787	98	719 / 737	None	ABC00043 ABC00067 ABC00650 ABC52628
MLOC_75942.3	823	0.0	7 - 735	96	711 / 737	None	ABC00043 ABC00067 ABC00650 ABC52628
MLOC_65048.1	523	3e-143	60 - 411	93	330 / 356	None	ABC00043 ABC00067 ABC00650
MLOC_65048.2	518	5e-141	1 - 340	93	320 / 343	None	ABC00043 ABC00067 ABC00650
AK367018	719	5e-111	45 - 358	90	282 / 314	None	ABC00043 ABC00067 ABC00367 ABC00650
MLOC_72250.1	708	5e-111	128 - 441	90	282 / 314	None	ABC00043 ABC00067 ABC00367 ABC00650