barSeed - Barley Seed Development Database

Probe ABC00067

Source Contig ABC00067

barSeed

Links

Affymetrix Source Sequence (736 bp)

>ABC00067 736
GCGGCGGCTTAGGGTTTTAACTCGCATCCATTCTCAAGGTTAGCAGGAGACCGGCCATGG
CGCCGTCGCAGCCCAAGTCAGGGCTCTTCGTTGGCATCAACAAGGGCCACGTCGTCACCA
AGCGCGAGCTGCCGCCACGCCCGTCCGACCGCAAGGGGAAAGGTACCAAGAGGGTGCTGT
TTGTCAGGAACTTGATTAGGGAGGTTGCTGGCTTTGCTCCCTATGAGAAGCGTATCACTG
AGCTTCTTAAGGTTGGAAAGGACAAGCGTGCACTCAAGGTCGCCAAGAGGAAGCTTGGTA
CTCACAAGAGAGCGAAGAAGAAGCGAGAGGAGATGTCAAGTGTCCTCAGGAAGATGAGGT
CTGGTGGTGGTGCTGCTGCCGACAAGAAGAAATAGATTTTGCATGTTGGCGAACATTATT
TATATCAATGCTTTGCCTCGTATTTTCAGATTATGCCAAGTTTGTAGCTTGTGGAAATTG
GATACGAGTGTAGCGCTATCTTTAAGTTTATATCAATGCTTTGCCTCACATCTTAAAAAA
AAAAAATCAAGTTTAGAGTAAAACAATGAATTTTCAGCACTATCTGCCCAACTGGATTGA
CATAGTAGTACATTGCATTCTGAGTTTAGAGTAAAACTTTTATTTTTGACACTCTTTTTT
GTGAACTTCTTGTTTCCGTAATCCACTATCTATAGTACTAAATGCTTTCTATTTTACGGA
AAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_65048.1	523	0.0	10 - 523	99	513 / 514	None	ABC00043 ABC00067 ABC00650
MLOC_65048.2	518	0.0	1 - 358	99	358 / 359	None	ABC00043 ABC00067 ABC00650
MLOC_75942.3	823	1e-151	11 - 418	91	371 / 409	None	ABC00043 ABC00067 ABC00650 ABC52628
MLOC_75942.1	1365	3e-148	258 - 613	94	333 / 356	CUST_22100_PI390587928	ABC00043 ABC00067 ABC00650 ABC52628
MLOC_75942.2	1165	3e-148	115 - 470	94	333 / 356	None	ABC00043 ABC00067 ABC00650 ABC52628
AK367018	719	2e-109	45 - 358	89	281 / 314	None	ABC00043 ABC00067 ABC00367 ABC00650
MLOC_72250.1	708	2e-109	128 - 441	89	281 / 314	None	ABC00043 ABC00067 ABC00367 ABC00650