barSeed - Barley Seed Development Database

Probe ABC00043

Source Contig ABC00043

barSeed

Links

Affymetrix Source Sequence (772 bp)

>ABC00043 772
GCCGCTTCACTTCTCCCAGGTAAAGGAAAGGTTCGCCCATGGCTCCGTCGCAGCCCAAGT
CGGGCCTCTTCGTGGGCATCAACAAGGGCCACGTTGTCACCAAGCGCGAGCTGCCGCCGC
GCCCGTCCGACCGCAAGGGGAAAGGTACCAAGAGGGTGCATTTCGTTAGGAGCTTGATCA
GGGAGGTTGCTGGGTTTGCTCCATATGAGAAGCGTATCACTGAGCTTCTCAAGGTTGGCA
AGGATAAGCGTGCTCTGAAGGTGGCGAAGCGAAAGTTGGGCACCCACAAGAGGGCCAAGA
AGAAGAGAGAGGAGATGTCCAGTGTCCTCAGGAAGATGAGATCTGCTGGTACTGGAACCG
AGAAGAAGAAGTAGAGTATCCCAAGCTCGTGAAGTTAATGGCAATCTTCTGTTCTGGTGG
CCAGTTTTTACTACATGTAGAACCTACTAGACTTGAAACTGTTACCCGCCAGCTAAAATT
ATGCTATGTTGAACCTCCTGTCCTGTGAGATTTTTGATCTACTTTGCAAAGCCTGGCTTT
CACCTTGTTAAAATTCTTGGTTTGCTTTTTCATTATCTGTTAGCTTCATGTGGCATTCAT
TGCCTGTGGCTGTGGCTTACAATTGGCTTACGTGTGGTTAATTTCCATCCTGTAGGCTCC
TTGGTTAAGAACCAACTTGTCATGGATGCCATGTTTTTAATACTAGCAAAAAAAAAAAAA
CATGCATTTTTAATTCAATAACCACGACTCAAGAAACAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK367018	719	0.0	9 - 714	99	706 / 711	None	ABC00043 ABC00067 ABC00367 ABC00650
MLOC_72250.1	708	0.0	1 - 454	100	454 / 454	None	ABC00043 ABC00067 ABC00367 ABC00650
MLOC_75942.1	1365	2e-114	262 - 575	90	284 / 314	CUST_22100_PI390587928	ABC00043 ABC00067 ABC00650 ABC52628
MLOC_75942.3	823	2e-114	67 - 380	90	284 / 314	None	ABC00043 ABC00067 ABC00650 ABC52628
MLOC_75942.2	1165	2e-114	119 - 432	90	284 / 314	None	ABC00043 ABC00067 ABC00650 ABC52628
MLOC_65048.2	518	2e-109	23 - 336	89	281 / 314	None	ABC00043 ABC00067 ABC00650
MLOC_65048.1	523	1e-107	64 - 377	89	280 / 314	None	ABC00043 ABC00067 ABC00650