barSeed - Barley Seed Development Database

Probe ABC00603

Source Contig ABC00603

barSeed

Links

Affymetrix Source Sequence (849 bp)

>ABC00603 849
GACCCAGAGGTTCGGGCATGGCAGCTCCGAGAGCGCTCGCCATCTGCGTCCTGCTGGCGA
TCGCCGTCGCGAATGCCGAGGCGGCGTCCGTCGTCATCGGCCTGGCCAAGTGCGCCGACT
GCACCGGGAAGAACATCAAGGCCGAGGAAGCCTTCAAGGCTCTGCAGGTGGCGATCAAGT
GCAGGAACAGCGCCGGCGAGTACGAGAGCAAGGCGGTGGGCGCCCTCGACGGCACCGGCG
CCTTCAGCGTGCCCCTGGCCGCCGACCTCCACGGCGCCGACTGCGTCGCGCAGCTCCACA
GCGCCGCCTCCAACGCGCCGTGCCCCGGCCAGGAGCCATCCAAGATCGTGCCGGTGTCTG
AGGGCACCACTTACGGCATCGTCGCCGGTGATAACACCGCCACGCCGTCCGCGACGTCGC
CGGAGTGCGCGTCGATGACCCTGTGCGGGCCCATCAAGAAGCACATCATGGAACACTTCC
ACCACAAAAAGCCCGTGCCGCCGAAGCCGGAGCCCAAGCCAGAGCCCCACCCTGACTACG
GCCCCGTGCCCAAGCCCGAGCCCAAGCCGCAGCCGCACCCGGACTACCACCCCGTCCCTC
CCACCCCCACCTACGGCGGCGGCGGCGGCGGCGGCGGATACCACGGACACCATTGAGTCC
GATCTACGACCGACCTGCCCATTGGTGAAATCTCATCACCGAGTTCGTGAGTGATCGACG
TTGGTATTTATGATCAGTTTGCATGCTGTGCGCGCGTGTGTCAGGCTGAGTGTGGGGGTG
TGGTTGGTGTGTTGCTTTATCAAGATTTTGTAACTTCGGTGTGTTTTCTCGTAAAAAAAA
AAAAAAAGG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK374445	935	0.0	64 - 890	99	824 / 833	CUST_35671_PI390587928	ABC00152 ABC00327 ABC00444 ABC00603 ABC00704
AK359091	949	0.0	53 - 900	94	798 / 848	CUST_35670_PI390587928 CUST_35676_PI390587928 CUST_454_PI415269222	ABC00061 ABC00152 ABC00327 ABC00444 ABC00553 ABC00603 ABC00704 ABC00970
AK251031.1	1127	0.0	50 - 717	91	609 / 668	CUST_454_PI415269222 CUST_35673_PI390587928 CUST_15479_PI390587928	ABC00061 ABC00152 ABC00327 ABC00444 ABC00553 ABC00603 ABC00704 ABC00970
MLOC_71561.1	1030	0.0	225 - 892	91	609 / 668	CUST_454_PI415269222	ABC00061 ABC00152 ABC00327 ABC00444 ABC00553 ABC00603 ABC00704 ABC00970
AK251384.1	1001	0.0	57 - 728	89	600 / 672	CUST_37552_PI390587928 CUST_454_PI415269222	ABC00061 ABC00152 ABC00327 ABC00444 ABC00553 ABC00603 ABC00704 ABC00970
AK250520.1	1076	0.0	134 - 771	90	578 / 641	CUST_35674_PI390587928 CUST_35675_PI390587928	ABC00061 ABC00152 ABC00327 ABC00444 ABC00603 ABC00704 ABC00970
MLOC_32207.1	788	0.0	1 - 452	99	449 / 452	None	ABC00152 ABC00444 ABC00603 ABC00704
AK251674.1	1009	0.0	74 - 806	87	644 / 740	CUST_454_PI415269222	ABC00061 ABC00152 ABC00327 ABC00444 ABC00553 ABC00603 ABC00704 ABC00970
AK253095.1	984	0.0	57 - 657	89	538 / 602	CUST_37556_PI390587928 CUST_453_PI415269222 CUST_454_PI415269222 CUST_37553_PI390587928	ABC00061 ABC00152 ABC00327 ABC00444 ABC00553 ABC00603 ABC00704 ABC00970
MLOC_81380.1	717	1e-171	4 - 504	89	445 / 502	CUST_454_PI415269222	ABC00061 ABC00152 ABC00444 ABC00603 ABC00704 ABC00970
MLOC_35435.1	826	8e-169	332 - 826	88	438 / 495	CUST_37552_PI390587928 CUST_454_PI415269222	ABC00152 ABC00444 ABC00603 ABC00704 ABC00970
AK252186.1	920	5e-66	461 - 641	92	169 / 184	CUST_35674_PI390587928 CUST_35675_PI390587928	ABC00061 ABC00152 ABC00327 ABC00444 ABC00603 ABC00704 ABC00970
AK249150.1	845	2e-124	41 - 491	85	386 / 454	None	ABC00152 ABC00444 ABC00603 ABC00704 ABC41281
AK354563	1022	2e-124	33 - 483	85	386 / 454	CUST_35672_PI390587928	ABC00152 ABC00444 ABC00603 ABC00704 ABC41281
MLOC_75012.1	1152	2e-124	148 - 598	85	386 / 454	CUST_35672_PI390587928	ABC00152 ABC00444 ABC00603 ABC00704 ABC41281
MLOC_45467.1	474	1e-112	125 - 474	88	307 / 350	None	ABC00152 ABC00603 ABC00704
MLOC_48354.1	337	3e-108	119 - 337	99	217 / 219	CUST_35670_PI390587928 CUST_35676_PI390587928	ABC00603
MLOC_47693.2	254	3e-68	41 - 250	89	187 / 210	None	ABC00152 ABC00603 ABC00704
MLOC_23962.1	339	4e-67	1 - 219	89	196 / 220	CUST_35670_PI390587928 CUST_35676_PI390587928	ABC00603 ABC00704
MLOC_47693.1	228	3e-53	41 - 216	89	156 / 176	None	ABC00603 ABC00704