Probe CUST_5694_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5694_PI426222305 | JHI_St_60k_v1 | DMT400023103 | CCTGACACAAACATCAGTGCGTCAAAACAACAGTACAATGATTAATTTGAGTTATTCTCT |
All Microarray Probes Designed to Gene DMG400008947
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5694_PI426222305 | JHI_St_60k_v1 | DMT400023103 | CCTGACACAAACATCAGTGCGTCAAAACAACAGTACAATGATTAATTTGAGTTATTCTCT |
| CUST_5507_PI426222305 | JHI_St_60k_v1 | DMT400023104 | GACTTGATGGGACTTCTGCTCTACAACATTTTCGACTTTAAACTATCTTTTCATTTGTCT |
| CUST_5785_PI426222305 | JHI_St_60k_v1 | DMT400023102 | CTTTATGATGTGGTAAAGGGATATCATTGTTAAATACTCTGAGGAAGTGAAGAAACTCGG |
Microarray Signals from CUST_5694_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 19.725 | 3.65764 | 0.846431 | 0.160236 |
| ABA 1h | 21.6423 | 4.29173 | 1.01269 | 0.193485 |
| ACC 1h | 35.5624 | 12.458 | 1.22898 | 0.595262 |
| BABA 1h | 32.3353 | 11.3185 | 1.23884 | 0.441698 |
| Chitin 1h | 24.5533 | 5.95837 | 1.12288 | 0.295149 |
| Epi 1h | 26.5647 | 6.63992 | 1.25784 | 0.325944 |
| SA 1h | 27.5463 | 6.69621 | 1.09615 | 0.205942 |
| Me-JA 1h | 9.1359 | 3.71933 | 0.451201 | 0.215227 |
| Control 6h | 31.215 | 12.5827 | 1.06989 | 0.552041 |
| ABA 6h | 43.4014 | 18.6178 | 1.18576 | 1.28039 |
| ACC 6h | 54.4228 | 9.7212 | 1.99743 | 0.53879 |
| BABA 6h | 23.1116 | 5.94746 | 0.839134 | 0.188674 |
| Chitin 6h | 21.9779 | 7.44197 | 0.748507 | 0.415824 |
| Epi 6h | 27.7211 | 7.2604 | 1.00154 | 0.243333 |
| SA 6h | 15.2527 | 8.31381 | 0.506135 | 0.272383 |
| Me-JA 6h | 16.388 | 3.96823 | 0.71257 | 0.172648 |
Source Transcript PGSC0003DMT400023103 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G06620.1 | +2 | 2e-104 | 327 | 161/278 (58%) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365 |