Probe CUST_49786_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_49786_PI426222305 | JHI_St_60k_v1 | DMT400013905 | AGGAATTGTCGGAACTCTTCTTATTCCGGTTGTACACGGTGTCTCGGTGCTTTACAAAAG |
All Microarray Probes Designed to Gene DMG400005442
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_49781_PI426222305 | JHI_St_60k_v1 | DMT400013906 | TTTGTAGCTCAACGGTGACGGTGGAAAAAATCGAACACACAAAATGGATGTAACCGGTGG |
| CUST_49786_PI426222305 | JHI_St_60k_v1 | DMT400013905 | AGGAATTGTCGGAACTCTTCTTATTCCGGTTGTACACGGTGTCTCGGTGCTTTACAAAAG |
Microarray Signals from CUST_49786_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 323.95 | 53.2277 | 0.729243 | 0.069135 |
| ABA 1h | 136.802 | 21.5077 | 0.348451 | 0.044863 |
| ACC 1h | 222.753 | 79.827 | 0.415458 | 0.18401 |
| BABA 1h | 238.389 | 40.5514 | 0.55568 | 0.0641352 |
| Chitin 1h | 219.45 | 43.8051 | 0.538027 | 0.0816334 |
| Epi 1h | 181.956 | 19.4612 | 0.479678 | 0.0427807 |
| SA 1h | 223.846 | 44.6005 | 0.481953 | 0.087923 |
| Me-JA 1h | 96.719 | 12.4743 | 0.269089 | 0.0179313 |
| Control 6h | 1005.74 | 311.858 | 2.02543 | 0.664245 |
| ABA 6h | 679.462 | 39.3909 | 1.47463 | 0.11335 |
| ACC 6h | 917.044 | 166.087 | 1.78505 | 0.13729 |
| BABA 6h | 745.735 | 65.3728 | 1.52583 | 0.0911548 |
| Chitin 6h | 851.674 | 49.455 | 1.84153 | 0.128357 |
| Epi 6h | 930.368 | 190.606 | 1.83307 | 0.394175 |
| SA 6h | 707.009 | 103.6 | 1.61384 | 0.108339 |
| Me-JA 6h | 698.169 | 115.083 | 1.5735 | 0.134412 |
Source Transcript PGSC0003DMT400013905 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G28100.1 | +1 | 3e-134 | 394 | 200/276 (72%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:13965300-13966697 REVERSE LENGTH=304 |