Probe CUST_49781_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_49781_PI426222305 | JHI_St_60k_v1 | DMT400013906 | TTTGTAGCTCAACGGTGACGGTGGAAAAAATCGAACACACAAAATGGATGTAACCGGTGG |
All Microarray Probes Designed to Gene DMG400005442
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_49781_PI426222305 | JHI_St_60k_v1 | DMT400013906 | TTTGTAGCTCAACGGTGACGGTGGAAAAAATCGAACACACAAAATGGATGTAACCGGTGG |
| CUST_49786_PI426222305 | JHI_St_60k_v1 | DMT400013905 | AGGAATTGTCGGAACTCTTCTTATTCCGGTTGTACACGGTGTCTCGGTGCTTTACAAAAG |
Microarray Signals from CUST_49781_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 110.13 | 24.8569 | 0.550799 | 0.0926843 |
| ABA 1h | 53.8548 | 8.63801 | 0.312199 | 0.04966 |
| ACC 1h | 81.5914 | 26.0234 | 0.373553 | 0.108159 |
| BABA 1h | 76.2963 | 8.07191 | 0.412331 | 0.0322316 |
| Chitin 1h | 68.2921 | 18.2142 | 0.374109 | 0.0687488 |
| Epi 1h | 57.3232 | 8.05078 | 0.342594 | 0.038268 |
| SA 1h | 66.9384 | 15.9072 | 0.321095 | 0.0764164 |
| Me-JA 1h | 26.0957 | 3.95815 | 0.166905 | 0.0256395 |
| Control 6h | 469.212 | 134.364 | 2.23673 | 0.574432 |
| ABA 6h | 303.204 | 22.2896 | 1.49503 | 0.151995 |
| ACC 6h | 410.263 | 87.9477 | 1.79378 | 0.227559 |
| BABA 6h | 361.917 | 35.2381 | 1.68719 | 0.115757 |
| Chitin 6h | 321.462 | 19.0586 | 1.58875 | 0.108868 |
| Epi 6h | 390.589 | 55.7707 | 1.79126 | 0.302721 |
| SA 6h | 303.776 | 42.4075 | 1.58482 | 0.0942251 |
| Me-JA 6h | 324.319 | 70.1034 | 1.63386 | 0.233013 |
Source Transcript PGSC0003DMT400013906 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G28100.1 | +1 | 9e-37 | 132 | 66/86 (77%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:13965300-13966697 REVERSE LENGTH=304 |