Probe CUST_37878_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_37878_PI426222305 | JHI_St_60k_v1 | DMT400011013 | GAGCTCCTGACCACATGTCAATAAGTTGGGGGATTTTAGCTTAAAAGTTTAATCTTATAT |
All Microarray Probes Designed to Gene DMG400004312
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_37861_PI426222305 | JHI_St_60k_v1 | DMT400011014 | GAGCTCCTGACCACATGTCAATAAGTTGGGGGATTTTAGCTTAAAAGTTTAATCTTATAT |
| CUST_37873_PI426222305 | JHI_St_60k_v1 | DMT400011015 | GAGCTCCTGACCACATGTCAATAAGTTGGGGGATTTTAGCTTAAAAGTTTAATCTTATAT |
| CUST_37878_PI426222305 | JHI_St_60k_v1 | DMT400011013 | GAGCTCCTGACCACATGTCAATAAGTTGGGGGATTTTAGCTTAAAAGTTTAATCTTATAT |
Microarray Signals from CUST_37878_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 5590.97 | 560.044 | 0.606414 | 0.0743607 |
| ABA 1h | 4622.08 | 1791.18 | 0.469018 | 0.221727 |
| ACC 1h | 5613.85 | 2750.31 | 0.442746 | 0.285075 |
| BABA 1h | 8909.59 | 2097.45 | 0.94412 | 0.169483 |
| Chitin 1h | 5314.38 | 1336.83 | 0.605392 | 0.153051 |
| Epi 1h | 5073.67 | 1213.62 | 0.601973 | 0.162263 |
| SA 1h | 9640.12 | 2182.88 | 0.981665 | 0.213437 |
| Me-JA 1h | 14201.4 | 5187.11 | 1.69092 | 0.462317 |
| Control 6h | 13753.7 | 2058.76 | 1.46662 | 0.103378 |
| ABA 6h | 7710.69 | 1025.57 | 0.781142 | 0.0615615 |
| ACC 6h | 23655.4 | 2524.91 | 2.23677 | 0.506006 |
| BABA 6h | 13691.6 | 3752.25 | 1.25148 | 0.305796 |
| Chitin 6h | 9496.4 | 564.767 | 0.974824 | 0.0842022 |
| Epi 6h | 12279.1 | 1583.53 | 1.17549 | 0.177187 |
| SA 6h | 15829.4 | 2980.04 | 1.68768 | 0.160521 |
| Me-JA 6h | 31884 | 2723.64 | 3.48337 | 0.201113 |
Source Transcript PGSC0003DMT400011013 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G63520.1 | +3 | 1e-40 | 157 | 123/409 (30%) | carotenoid cleavage dioxygenase 1 | chr3:23452940-23455896 FORWARD LENGTH=538 |