Probe CUST_37873_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_37873_PI426222305 | JHI_St_60k_v1 | DMT400011015 | GAGCTCCTGACCACATGTCAATAAGTTGGGGGATTTTAGCTTAAAAGTTTAATCTTATAT |
All Microarray Probes Designed to Gene DMG400004312
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_37861_PI426222305 | JHI_St_60k_v1 | DMT400011014 | GAGCTCCTGACCACATGTCAATAAGTTGGGGGATTTTAGCTTAAAAGTTTAATCTTATAT |
| CUST_37873_PI426222305 | JHI_St_60k_v1 | DMT400011015 | GAGCTCCTGACCACATGTCAATAAGTTGGGGGATTTTAGCTTAAAAGTTTAATCTTATAT |
| CUST_37878_PI426222305 | JHI_St_60k_v1 | DMT400011013 | GAGCTCCTGACCACATGTCAATAAGTTGGGGGATTTTAGCTTAAAAGTTTAATCTTATAT |
Microarray Signals from CUST_37873_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 5265.49 | 749.37 | 0.544008 | 0.0816055 |
| ABA 1h | 4269.75 | 1552.88 | 0.422726 | 0.194806 |
| ACC 1h | 5724.55 | 3001.33 | 0.414396 | 0.30464 |
| BABA 1h | 9031.34 | 2360.88 | 0.903215 | 0.202629 |
| Chitin 1h | 5234.58 | 1438.17 | 0.566603 | 0.159259 |
| Epi 1h | 4954.28 | 1260.56 | 0.558288 | 0.169734 |
| SA 1h | 9538.12 | 2096.29 | 0.935312 | 0.190594 |
| Me-JA 1h | 14395.5 | 5580.54 | 1.62583 | 0.483818 |
| Control 6h | 14479.7 | 1807.61 | 1.49982 | 0.086593 |
| ABA 6h | 8298.02 | 1080.64 | 0.809942 | 0.0650298 |
| ACC 6h | 24505.3 | 2620.07 | 2.23191 | 0.513168 |
| BABA 6h | 14013.2 | 4073.46 | 1.21966 | 0.33766 |
| Chitin 6h | 9590.3 | 554.104 | 0.950876 | 0.0548999 |
| Epi 6h | 12778.8 | 1897.81 | 1.17272 | 0.176433 |
| SA 6h | 16125.2 | 3657.67 | 1.62322 | 0.22914 |
| Me-JA 6h | 33245.3 | 2259.85 | 3.50907 | 0.202596 |
Source Transcript PGSC0003DMT400011015 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G63520.1 | +2 | 7e-49 | 181 | 157/567 (28%) | carotenoid cleavage dioxygenase 1 | chr3:23452940-23455896 FORWARD LENGTH=538 |