Probe CUST_33399_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_33399_PI426222305 | JHI_St_60k_v1 | DMT400017869 | TACTTTGATTGAAAAGAAACTTTCTGTTGCATTCTTTTTGGGGTAATGAAGGGCCAGTTT |
All Microarray Probes Designed to Gene DMG400006940
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_33382_PI426222305 | JHI_St_60k_v1 | DMT400017868 | GTTTACGGCTTTCCATATTTGTTTCTGATTCTTTGAAAATCCTGTAGGTAGTCAATGTTG |
| CUST_33246_PI426222305 | JHI_St_60k_v1 | DMT400017870 | CGGAATGAATGAGAATAGTTACTGATAGTATGAATTCTCGTTTTGCATCAGTGACCTATT |
| CUST_33316_PI426222305 | JHI_St_60k_v1 | DMT400017872 | GTTGATGGTATTACTGGTGGCTTCAATTTTCAGGTAATATGAGCTTGATCTGAATCCACA |
| CUST_33333_PI426222305 | JHI_St_60k_v1 | DMT400017871 | CGGAATGAATGAGAATAGTTACTGATAGTATGAATTCTCGTTTTGCATCAGTGACCTATT |
| CUST_33399_PI426222305 | JHI_St_60k_v1 | DMT400017869 | TACTTTGATTGAAAAGAAACTTTCTGTTGCATTCTTTTTGGGGTAATGAAGGGCCAGTTT |
| CUST_33363_PI426222305 | JHI_St_60k_v1 | DMT400017873 | GGATCCTTCATTTGTTTTGAAGTACATGTGATGTGAGCGGTTATGGGTTCCTGTGAAATA |
Microarray Signals from CUST_33399_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 49.8647 | 7.28635 | 0.839908 | 0.0971865 |
| ABA 1h | 36.0845 | 6.17279 | 0.683825 | 0.0952814 |
| ACC 1h | 51.2138 | 4.60525 | 0.856451 | 0.0777029 |
| BABA 1h | 36.9297 | 7.54274 | 0.628519 | 0.0824514 |
| Chitin 1h | 35.3086 | 7.22908 | 0.645083 | 0.118654 |
| Epi 1h | 35.4963 | 4.9444 | 0.694386 | 0.0806295 |
| SA 1h | 44.3136 | 8.28118 | 0.717317 | 0.120515 |
| Me-JA 1h | 27.4447 | 3.75896 | 0.572639 | 0.0796054 |
| Control 6h | 211.046 | 20.9184 | 3.5955 | 0.216347 |
| ABA 6h | 88.1747 | 8.95887 | 1.41581 | 0.100402 |
| ACC 6h | 125.545 | 23.1715 | 1.81855 | 0.206825 |
| BABA 6h | 153.247 | 29.2567 | 2.27653 | 0.490156 |
| Chitin 6h | 153.633 | 10.1772 | 2.47944 | 0.156083 |
| Epi 6h | 188.459 | 25.032 | 2.82742 | 0.616453 |
| SA 6h | 105.151 | 42.7213 | 1.33704 | 0.891631 |
| Me-JA 6h | 86.4769 | 19.2261 | 1.42013 | 0.217601 |
Source Transcript PGSC0003DMT400017869 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G39940.1 | +3 | 1e-145 | 434 | 246/409 (60%) | FAD/NAD(P)-binding oxidoreductase family protein | chr5:15987649-15990561 FORWARD LENGTH=480 |