Probe CUST_33246_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_33246_PI426222305 | JHI_St_60k_v1 | DMT400017870 | CGGAATGAATGAGAATAGTTACTGATAGTATGAATTCTCGTTTTGCATCAGTGACCTATT |
All Microarray Probes Designed to Gene DMG400006940
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_33382_PI426222305 | JHI_St_60k_v1 | DMT400017868 | GTTTACGGCTTTCCATATTTGTTTCTGATTCTTTGAAAATCCTGTAGGTAGTCAATGTTG |
| CUST_33246_PI426222305 | JHI_St_60k_v1 | DMT400017870 | CGGAATGAATGAGAATAGTTACTGATAGTATGAATTCTCGTTTTGCATCAGTGACCTATT |
| CUST_33316_PI426222305 | JHI_St_60k_v1 | DMT400017872 | GTTGATGGTATTACTGGTGGCTTCAATTTTCAGGTAATATGAGCTTGATCTGAATCCACA |
| CUST_33333_PI426222305 | JHI_St_60k_v1 | DMT400017871 | CGGAATGAATGAGAATAGTTACTGATAGTATGAATTCTCGTTTTGCATCAGTGACCTATT |
| CUST_33399_PI426222305 | JHI_St_60k_v1 | DMT400017869 | TACTTTGATTGAAAAGAAACTTTCTGTTGCATTCTTTTTGGGGTAATGAAGGGCCAGTTT |
| CUST_33363_PI426222305 | JHI_St_60k_v1 | DMT400017873 | GGATCCTTCATTTGTTTTGAAGTACATGTGATGTGAGCGGTTATGGGTTCCTGTGAAATA |
Microarray Signals from CUST_33246_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 500.742 | 36.2777 | 0.793013 | 0.0460736 |
| ABA 1h | 404.119 | 39.0286 | 0.720247 | 0.0780954 |
| ACC 1h | 498.277 | 28.9939 | 0.772217 | 0.0521586 |
| BABA 1h | 436.685 | 56.3766 | 0.708082 | 0.0412986 |
| Chitin 1h | 443.124 | 63.9881 | 0.76805 | 0.0960339 |
| Epi 1h | 388.66 | 32.7487 | 0.710167 | 0.0414507 |
| SA 1h | 451.642 | 55.046 | 0.690099 | 0.0790513 |
| Me-JA 1h | 338.876 | 19.9089 | 0.658601 | 0.0385683 |
| Control 6h | 1717.19 | 203.049 | 2.69079 | 0.155451 |
| ABA 6h | 849.539 | 60.5494 | 1.26581 | 0.073269 |
| ACC 6h | 1196.63 | 207.085 | 1.60687 | 0.173377 |
| BABA 6h | 1409.86 | 284.239 | 1.92708 | 0.420112 |
| Chitin 6h | 1477.78 | 139.989 | 2.19176 | 0.139635 |
| Epi 6h | 1459.14 | 266.688 | 1.98854 | 0.560828 |
| SA 6h | 1187.22 | 209.816 | 1.84213 | 0.147668 |
| Me-JA 6h | 842.794 | 192.476 | 1.27867 | 0.189198 |
Source Transcript PGSC0003DMT400017870 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G39940.1 | +3 | 2e-164 | 480 | 268/446 (60%) | FAD/NAD(P)-binding oxidoreductase family protein | chr5:15987649-15990561 FORWARD LENGTH=480 |