Probe CUST_2889_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2889_PI426222305 | JHI_St_60k_v1 | DMT400033260 | TTGGAGCCCTCTTCAACTTCAGAAAAAAGGCACCATTTTTCATTTTATCTAAGGATTCAA |
All Microarray Probes Designed to Gene DMG400012774
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_3247_PI426222305 | JHI_St_60k_v1 | DMT400033259 | CCAACCCCTCTCATCAAAATGTTTCCTTTTGATACTAAATCCACCTCATTGGTATATATG |
| CUST_3092_PI426222305 | JHI_St_60k_v1 | DMT400033257 | CCTTGATGGCATCATTAAATAGCCACCATTTTTACCCTAACAAGTTCTCAAGTAGAGTAT |
| CUST_2889_PI426222305 | JHI_St_60k_v1 | DMT400033260 | TTGGAGCCCTCTTCAACTTCAGAAAAAAGGCACCATTTTTCATTTTATCTAAGGATTCAA |
Microarray Signals from CUST_2889_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 78.7939 | 18.5663 | 0.913846 | 0.157956 |
| ABA 1h | 50.7008 | 14.4774 | 0.635558 | 0.169592 |
| ACC 1h | 105.182 | 30.6511 | 1.15278 | 0.281977 |
| BABA 1h | 76.5976 | 14.3659 | 0.930952 | 0.100296 |
| Chitin 1h | 42.2739 | 4.39384 | 0.569933 | 0.0595315 |
| Epi 1h | 51.8996 | 7.59833 | 0.717184 | 0.081853 |
| SA 1h | 97.6445 | 21.8948 | 1.09988 | 0.231389 |
| Me-JA 1h | 196.218 | 36.2094 | 2.84216 | 0.299964 |
| Control 6h | 120.565 | 61.7688 | 1.13935 | 0.548 |
| ABA 6h | 95.999 | 20.2116 | 1.05789 | 0.163619 |
| ACC 6h | 132.866 | 13.3566 | 1.39934 | 0.0941202 |
| BABA 6h | 153.148 | 13.5343 | 1.65678 | 0.116789 |
| Chitin 6h | 122.815 | 23.0525 | 1.35278 | 0.257377 |
| Epi 6h | 96.8324 | 12.9176 | 1.02818 | 0.205037 |
| SA 6h | 83.1592 | 23.6977 | 0.934271 | 0.20354 |
| Me-JA 6h | 416.059 | 24.3798 | 5.0852 | 0.589997 |
Source Transcript PGSC0003DMT400033260 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G60810.1 | +1 | 3e-85 | 260 | 127/179 (71%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 444 Blast hits to 444 proteins in 143 species: Archae - 0; Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). | chr3:22470579-22471756 FORWARD LENGTH=214 |