Probe CUST_3247_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_3247_PI426222305 | JHI_St_60k_v1 | DMT400033259 | CCAACCCCTCTCATCAAAATGTTTCCTTTTGATACTAAATCCACCTCATTGGTATATATG |
All Microarray Probes Designed to Gene DMG400012774
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_3247_PI426222305 | JHI_St_60k_v1 | DMT400033259 | CCAACCCCTCTCATCAAAATGTTTCCTTTTGATACTAAATCCACCTCATTGGTATATATG |
| CUST_3092_PI426222305 | JHI_St_60k_v1 | DMT400033257 | CCTTGATGGCATCATTAAATAGCCACCATTTTTACCCTAACAAGTTCTCAAGTAGAGTAT |
| CUST_2889_PI426222305 | JHI_St_60k_v1 | DMT400033260 | TTGGAGCCCTCTTCAACTTCAGAAAAAAGGCACCATTTTTCATTTTATCTAAGGATTCAA |
Microarray Signals from CUST_3247_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 25.0436 | 6.77305 | 1.21544 | 0.27223 |
| ABA 1h | 14.8357 | 4.31914 | 0.779729 | 0.270284 |
| ACC 1h | 25.2927 | 10.5417 | 1.03653 | 0.515456 |
| BABA 1h | 23.1563 | 6.1029 | 1.17608 | 0.247654 |
| Chitin 1h | 17.238 | 5.60514 | 0.901437 | 0.379482 |
| Epi 1h | 29.8658 | 9.72247 | 1.63321 | 0.560859 |
| SA 1h | 38.8995 | 8.34512 | 1.88806 | 0.544428 |
| Me-JA 1h | 113.053 | 31.3635 | 6.69138 | 1.40773 |
| Control 6h | 12.3622 | 4.115 | 0.581013 | 0.233027 |
| ABA 6h | 22.2489 | 4.83313 | 1.03764 | 0.22261 |
| ACC 6h | 9.60847 | 4.59086 | 0.425396 | 0.211443 |
| BABA 6h | 32.6233 | 22.0794 | 0.947897 | 1.04464 |
| Chitin 6h | 14.0748 | 4.41475 | 0.644075 | 0.241971 |
| Epi 6h | 15.0264 | 4.57978 | 0.685879 | 0.216197 |
| SA 6h | 7.04178 | 4.08891 | 0.373237 | 0.21666 |
| Me-JA 6h | 38.0794 | 7.55524 | 1.92115 | 0.317018 |
Source Transcript PGSC0003DMT400033259 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G60810.1 | +2 | 2e-81 | 251 | 123/170 (72%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 444 Blast hits to 444 proteins in 143 species: Archae - 0; Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). | chr3:22470579-22471756 FORWARD LENGTH=214 |