Probe CUST_2697_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2697_PI426222305 | JHI_St_60k_v1 | DMT400080079 | GAATGTTAATAGATATCTCAACAGACTTGTCAATGTTATTACCAGGCTAAAACCAGTGGT |
All Microarray Probes Designed to Gene DMG400031182
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2687_PI426222305 | JHI_St_60k_v1 | DMT400080080 | ACCAGAAGATGTTATATGTGCTTTCATGCCGTCATTTACCATATGCTAAAACCAGTGGTT |
| CUST_2697_PI426222305 | JHI_St_60k_v1 | DMT400080079 | GAATGTTAATAGATATCTCAACAGACTTGTCAATGTTATTACCAGGCTAAAACCAGTGGT |
| CUST_2637_PI426222305 | JHI_St_60k_v1 | DMT400080081 | ACCAGAAGATGTTATATGTGCTTTCATGCCGTCATTTACCATATGCTAAAACCAGTGGTT |
Microarray Signals from CUST_2697_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 91.8715 | 15.2983 | 1.2844 | 0.124211 |
| ABA 1h | 47.6785 | 4.07469 | 0.771287 | 0.0662547 |
| ACC 1h | 77.2977 | 14.6312 | 1.04364 | 0.131553 |
| BABA 1h | 67.0231 | 9.35754 | 0.976209 | 0.0756171 |
| Chitin 1h | 61.7435 | 4.86959 | 0.984029 | 0.0777534 |
| Epi 1h | 59.6334 | 13.9467 | 0.939725 | 0.220407 |
| SA 1h | 47.3688 | 5.74305 | 0.651838 | 0.0655005 |
| Me-JA 1h | 44.1362 | 4.96256 | 0.766353 | 0.0714574 |
| Control 6h | 168.672 | 41.0843 | 2.25797 | 0.436783 |
| ABA 6h | 60.1385 | 9.72275 | 0.792257 | 0.0906139 |
| ACC 6h | 100.033 | 12.3882 | 1.2336 | 0.0855423 |
| BABA 6h | 102.829 | 23.1161 | 1.25893 | 0.270929 |
| Chitin 6h | 125.071 | 13.3644 | 1.6678 | 0.122013 |
| Epi 6h | 108.06 | 14.1952 | 1.35024 | 0.269537 |
| SA 6h | 65.0536 | 21.1329 | 0.812934 | 0.261546 |
| Me-JA 6h | 70.3105 | 21.1561 | 0.9126 | 0.239231 |
Source Transcript PGSC0003DMT400080079 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G09970.1 | +3 | 3e-12 | 66 | 36/117 (31%) | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15 proteins in 6 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:6246038-6247597 FORWARD LENGTH=250 |