Probe CUST_2687_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2687_PI426222305 | JHI_St_60k_v1 | DMT400080080 | ACCAGAAGATGTTATATGTGCTTTCATGCCGTCATTTACCATATGCTAAAACCAGTGGTT |
All Microarray Probes Designed to Gene DMG400031182
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2687_PI426222305 | JHI_St_60k_v1 | DMT400080080 | ACCAGAAGATGTTATATGTGCTTTCATGCCGTCATTTACCATATGCTAAAACCAGTGGTT |
| CUST_2697_PI426222305 | JHI_St_60k_v1 | DMT400080079 | GAATGTTAATAGATATCTCAACAGACTTGTCAATGTTATTACCAGGCTAAAACCAGTGGT |
| CUST_2637_PI426222305 | JHI_St_60k_v1 | DMT400080081 | ACCAGAAGATGTTATATGTGCTTTCATGCCGTCATTTACCATATGCTAAAACCAGTGGTT |
Microarray Signals from CUST_2687_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 1534.92 | 107.643 | 1.34526 | 0.0777222 |
| ABA 1h | 1063.2 | 96.9651 | 1.04949 | 0.0881351 |
| ACC 1h | 1140.89 | 219.482 | 0.936489 | 0.130231 |
| BABA 1h | 966.39 | 203.776 | 0.840515 | 0.111836 |
| Chitin 1h | 807.087 | 46.7268 | 0.790063 | 0.0708006 |
| Epi 1h | 831.37 | 114.545 | 0.828011 | 0.111534 |
| SA 1h | 1187.22 | 68.8201 | 1.01458 | 0.0586419 |
| Me-JA 1h | 663.531 | 55.9714 | 0.710827 | 0.0411932 |
| Control 6h | 1874.63 | 359.067 | 1.58412 | 0.208433 |
| ABA 6h | 910.779 | 52.8241 | 0.752489 | 0.0435394 |
| ACC 6h | 1397.95 | 286.828 | 1.03226 | 0.0596741 |
| BABA 6h | 1436.16 | 142.157 | 1.11932 | 0.109416 |
| Chitin 6h | 1548.48 | 89.626 | 1.27884 | 0.0738994 |
| Epi 6h | 1844.38 | 166.022 | 1.42881 | 0.200529 |
| SA 6h | 1078.64 | 355.955 | 0.815197 | 0.286402 |
| Me-JA 6h | 954.849 | 179.302 | 0.81355 | 0.0900647 |
Source Transcript PGSC0003DMT400080080 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G09970.1 | +1 | 4e-17 | 80 | 62/235 (26%) | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15 proteins in 6 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:6246038-6247597 FORWARD LENGTH=250 |