Probe CUST_2417_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2417_PI426222305 | JHI_St_60k_v1 | DMT400028755 | AGCTCATTTGTACCCGACGTTGAAGACCCTGATAATATTGTTCATGAGATCAAACGGAAG |
All Microarray Probes Designed to Gene DMG400011066
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2456_PI426222305 | JHI_St_60k_v1 | DMT400028753 | ATGTAACAGATGTATACTACGAATGATGAAACGTGGCAGCGGATTCTCGTTCCACGTCAC |
| CUST_2044_PI426222305 | JHI_St_60k_v1 | DMT400028754 | GCTCAAGATTTATTCCTGTTGATAGATTATCTCAGGGCTTATACTAGTCCCTCTAAGTTT |
| CUST_2417_PI426222305 | JHI_St_60k_v1 | DMT400028755 | AGCTCATTTGTACCCGACGTTGAAGACCCTGATAATATTGTTCATGAGATCAAACGGAAG |
Microarray Signals from CUST_2417_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 76.7229 | 10.2914 | 0.830286 | 0.0835373 |
| ABA 1h | 60.1671 | 4.94452 | 0.749941 | 0.077467 |
| ACC 1h | 66.2221 | 29.7434 | 0.474659 | 0.466418 |
| BABA 1h | 83.642 | 8.10406 | 0.949088 | 0.0684006 |
| Chitin 1h | 72.4827 | 6.85703 | 0.882221 | 0.156055 |
| Epi 1h | 62.4734 | 6.68659 | 0.787649 | 0.0737285 |
| SA 1h | 77.1085 | 21.2036 | 0.77326 | 0.223124 |
| Me-JA 1h | 131.808 | 20.5619 | 1.73878 | 0.125514 |
| Control 6h | 141.992 | 37.5813 | 1.43733 | 0.327861 |
| ABA 6h | 84.5528 | 7.15522 | 0.871446 | 0.0636728 |
| ACC 6h | 113.641 | 12.1276 | 1.08145 | 0.0749173 |
| BABA 6h | 133.812 | 12.6124 | 1.30765 | 0.0896628 |
| Chitin 6h | 119.502 | 8.15728 | 1.23441 | 0.0841938 |
| Epi 6h | 121.446 | 29.2226 | 1.11002 | 0.394885 |
| SA 6h | 118.708 | 22.2192 | 1.27692 | 0.414598 |
| Me-JA 6h | 134.894 | 22.066 | 1.4521 | 0.134498 |
Source Transcript PGSC0003DMT400028755 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g084820.1 | +1 | 0.0 | 582 | 276/285 (97%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:63543483-63547030 transcript_region:SL2.50ch10:63543483..63547030- go_terms:GO:0008270 functional_description:Palmitoyltransferase PFA4 (AHRD V1 ***- B6TA04_MAIZE); contains Interpro domain(s) IPR001594 Zinc finger, DHHC-type |
| TAIR PP10 | AT3G09320.1 | +1 | 2e-145 | 422 | 185/284 (65%) | DHHC-type zinc finger family protein | chr3:2862142-2864113 REVERSE LENGTH=286 |