Probe CUST_2044_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2044_PI426222305 | JHI_St_60k_v1 | DMT400028754 | GCTCAAGATTTATTCCTGTTGATAGATTATCTCAGGGCTTATACTAGTCCCTCTAAGTTT |
All Microarray Probes Designed to Gene DMG400011066
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2456_PI426222305 | JHI_St_60k_v1 | DMT400028753 | ATGTAACAGATGTATACTACGAATGATGAAACGTGGCAGCGGATTCTCGTTCCACGTCAC |
| CUST_2044_PI426222305 | JHI_St_60k_v1 | DMT400028754 | GCTCAAGATTTATTCCTGTTGATAGATTATCTCAGGGCTTATACTAGTCCCTCTAAGTTT |
| CUST_2417_PI426222305 | JHI_St_60k_v1 | DMT400028755 | AGCTCATTTGTACCCGACGTTGAAGACCCTGATAATATTGTTCATGAGATCAAACGGAAG |
Microarray Signals from CUST_2044_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 20.221 | 4.59773 | 0.952255 | 0.175292 |
| ABA 1h | 13.9281 | 5.8414 | 0.63921 | 0.275566 |
| ACC 1h | 14.3069 | 3.9319 | 0.625928 | 0.217398 |
| BABA 1h | 18.4516 | 3.89334 | 0.902183 | 0.197803 |
| Chitin 1h | 9.21261 | 3.23615 | 0.495422 | 0.185447 |
| Epi 1h | 11.1236 | 3.2211 | 0.57136 | 0.212896 |
| SA 1h | 17.754 | 12.2581 | 0.520938 | 0.520224 |
| Me-JA 1h | 33.7621 | 4.59646 | 2.00308 | 0.228729 |
| Control 6h | 53.5522 | 10.1519 | 2.52927 | 0.294944 |
| ABA 6h | 27.8179 | 3.80988 | 1.2721 | 0.178033 |
| ACC 6h | 28.4989 | 5.45057 | 1.17417 | 0.224139 |
| BABA 6h | 33.9284 | 9.01837 | 1.36887 | 0.397798 |
| Chitin 6h | 30.4358 | 6.81989 | 1.33184 | 0.3353 |
| Epi 6h | 38.1525 | 16.7414 | 1.38588 | 0.723077 |
| SA 6h | 19.0211 | 3.6509 | 0.927939 | 0.250567 |
| Me-JA 6h | 40.6968 | 13.6378 | 1.71899 | 0.699019 |
Source Transcript PGSC0003DMT400028754 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g084820.1 | +1 | 0.0 | 568 | 276/311 (89%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:63543483-63547030 transcript_region:SL2.50ch10:63543483..63547030- go_terms:GO:0008270 functional_description:Palmitoyltransferase PFA4 (AHRD V1 ***- B6TA04_MAIZE); contains Interpro domain(s) IPR001594 Zinc finger, DHHC-type |
| TAIR PP10 | AT3G09320.1 | +1 | 1e-139 | 408 | 186/310 (60%) | DHHC-type zinc finger family protein | chr3:2862142-2864113 REVERSE LENGTH=286 |