Probe CUST_2355_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2355_PI426222305 | JHI_St_60k_v1 | DMT400028827 | CATCAGAACAAAAGGTCTTACTGGAAAATGTCAAATTGAATCACTTAAGTCCCCTAGATA |
All Microarray Probes Designed to Gene DMG400011098
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2355_PI426222305 | JHI_St_60k_v1 | DMT400028827 | CATCAGAACAAAAGGTCTTACTGGAAAATGTCAAATTGAATCACTTAAGTCCCCTAGATA |
| CUST_2523_PI426222305 | JHI_St_60k_v1 | DMT400028828 | TTTCTTTCTTCATTATCTTCCCGAAGCGTTAAGGGATGAGAACAAATGGCCCCGTCTTCC |
Microarray Signals from CUST_2355_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 64.4815 | 20.279 | 0.568085 | 0.238193 |
| ABA 1h | 58.0859 | 10.286 | 0.616395 | 0.0742448 |
| ACC 1h | 48.1254 | 12.1841 | 0.425215 | 0.0834667 |
| BABA 1h | 160.977 | 28.6958 | 1.56994 | 0.464185 |
| Chitin 1h | 67.8071 | 10.802 | 0.715081 | 0.129166 |
| Epi 1h | 66.0495 | 9.55527 | 0.726479 | 0.11279 |
| SA 1h | 116.575 | 28.2451 | 1.03749 | 0.237944 |
| Me-JA 1h | 279.651 | 66.4481 | 3.10844 | 0.604848 |
| Control 6h | 112.339 | 7.37584 | 1.08749 | 0.125892 |
| ABA 6h | 83.2422 | 18.1422 | 0.727916 | 0.193167 |
| ACC 6h | 67.7453 | 37.3539 | 0.37469 | 0.324378 |
| BABA 6h | 144.734 | 46.9415 | 1.08689 | 0.54714 |
| Chitin 6h | 157.763 | 21.9455 | 1.41014 | 0.183377 |
| Epi 6h | 162.042 | 38.4669 | 1.303 | 0.467151 |
| SA 6h | 155.561 | 23.5883 | 1.48946 | 0.0942496 |
| Me-JA 6h | 1360.42 | 386.599 | 11.9893 | 5.70954 |
Source Transcript PGSC0003DMT400028827 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g085190.1 | +1 | 2e-49 | 162 | 80/84 (95%) | evidence_code:10F0H1E0IEG genomic_reference:SL2.50ch10 gene_region:63782165-63784408 transcript_region:SL2.50ch10:63782165..63784408- go_terms:GO:0016491,GO:0055114 functional_description:Anthocyanidin synthase (AHRD V1 **-- Q2EGB7_MALDO); contains Interpro domain(s) IPR005123 Oxoglutarate and iron-dependent oxygenase |
| TAIR PP10 | AT3G55970.1 | +1 | 2e-30 | 112 | 55/83 (66%) | jasmonate-regulated gene 21 | chr3:20766970-20769264 REVERSE LENGTH=363 |