Probe CUST_2120_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2120_PI426222305 | JHI_St_60k_v1 | DMT400027127 | ATGAAGAAACATTTGAGATATTGGGCTAAAACAGTTGCAACTGTGGTTATGCAAGAATCT |
All Microarray Probes Designed to Gene DMG400010464
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2120_PI426222305 | JHI_St_60k_v1 | DMT400027127 | ATGAAGAAACATTTGAGATATTGGGCTAAAACAGTTGCAACTGTGGTTATGCAAGAATCT |
| CUST_2029_PI426222305 | JHI_St_60k_v1 | DMT400027128 | TGAAAATCCCCTGCCTATTCAAGACTCTCTGACATCAGTTGAATCAGAAATCATTCTTCT |
Microarray Signals from CUST_2120_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 1938.73 | 311.013 | 1.91725 | 0.181793 |
| ABA 1h | 573.832 | 45.3761 | 0.653087 | 0.0378401 |
| ACC 1h | 1707.83 | 357.537 | 1.61808 | 0.28794 |
| BABA 1h | 1319.46 | 293.062 | 1.30356 | 0.205466 |
| Chitin 1h | 1193.48 | 68.9731 | 1.3441 | 0.109624 |
| Epi 1h | 1126.95 | 85.6203 | 1.31133 | 0.105446 |
| SA 1h | 1240.19 | 89.5297 | 1.21615 | 0.0702744 |
| Me-JA 1h | 2621.99 | 300.48 | 3.21017 | 0.185376 |
| Control 6h | 915.665 | 156.06 | 0.894592 | 0.0896601 |
| ABA 6h | 107.328 | 14.5497 | 0.10022 | 0.0140617 |
| ACC 6h | 651.869 | 73.8455 | 0.567535 | 0.0541598 |
| BABA 6h | 520.253 | 76.4389 | 0.461333 | 0.0622569 |
| Chitin 6h | 666.535 | 38.6777 | 0.633235 | 0.0366941 |
| Epi 6h | 619.348 | 106.907 | 0.53733 | 0.144333 |
| SA 6h | 590.234 | 119.077 | 0.577968 | 0.0638615 |
| Me-JA 6h | 1436.04 | 82.9653 | 1.46047 | 0.124249 |
Source Transcript PGSC0003DMT400027127 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g084230.1 | +1 | 4e-72 | 218 | 118/149 (79%) | evidence_code:10F0H0E0IEG genomic_reference:SL2.50ch10 gene_region:63185291-63186107 transcript_region:SL2.50ch10:63185291..63186107+ functional_description:Unknown Protein (AHRD V1) |
| TAIR PP10 | AT2G42760.1 | +1 | 5e-21 | 87 | 60/154 (39%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | chr2:17796382-17797185 REVERSE LENGTH=267 |