Probe CUST_2029_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2029_PI426222305 | JHI_St_60k_v1 | DMT400027128 | TGAAAATCCCCTGCCTATTCAAGACTCTCTGACATCAGTTGAATCAGAAATCATTCTTCT |
All Microarray Probes Designed to Gene DMG400010464
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2120_PI426222305 | JHI_St_60k_v1 | DMT400027127 | ATGAAGAAACATTTGAGATATTGGGCTAAAACAGTTGCAACTGTGGTTATGCAAGAATCT |
| CUST_2029_PI426222305 | JHI_St_60k_v1 | DMT400027128 | TGAAAATCCCCTGCCTATTCAAGACTCTCTGACATCAGTTGAATCAGAAATCATTCTTCT |
Microarray Signals from CUST_2029_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 438.939 | 39.3257 | 1.85766 | 0.108134 |
| ABA 1h | 130.319 | 8.12935 | 0.626746 | 0.0632167 |
| ACC 1h | 387.546 | 79.429 | 1.54822 | 0.260855 |
| BABA 1h | 285.016 | 41.8809 | 1.23259 | 0.0808542 |
| Chitin 1h | 279.929 | 19.8915 | 1.32058 | 0.19752 |
| Epi 1h | 256.052 | 27.8257 | 1.24656 | 0.134954 |
| SA 1h | 298.33 | 17.5331 | 1.23685 | 0.0930732 |
| Me-JA 1h | 640.543 | 59.856 | 3.31513 | 0.192152 |
| Control 6h | 195.872 | 46.8745 | 0.779425 | 0.148586 |
| ABA 6h | 25.5936 | 6.8389 | 0.0942865 | 0.0291713 |
| ACC 6h | 137.605 | 23.1091 | 0.49599 | 0.0502728 |
| BABA 6h | 115.83 | 28.5664 | 0.417293 | 0.101221 |
| Chitin 6h | 153.065 | 9.56629 | 0.611191 | 0.0465029 |
| Epi 6h | 142.568 | 35.4991 | 0.497661 | 0.203849 |
| SA 6h | 98.5602 | 11.0451 | 0.419452 | 0.0285752 |
| Me-JA 6h | 311.899 | 33.6875 | 1.32101 | 0.185384 |
Source Transcript PGSC0003DMT400027128 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g084230.1 | +1 | 2e-99 | 294 | 161/211 (76%) | evidence_code:10F0H0E0IEG genomic_reference:SL2.50ch10 gene_region:63185291-63186107 transcript_region:SL2.50ch10:63185291..63186107+ functional_description:Unknown Protein (AHRD V1) |
| TAIR PP10 | AT2G42760.1 | +1 | 1e-20 | 89 | 72/211 (34%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | chr2:17796382-17797185 REVERSE LENGTH=267 |