Probe CUST_2087_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2087_PI426222305 | JHI_St_60k_v1 | DMT400072449 | ATTTCAATTTTTCGTGTGGAAGACGTGAAGGCGGATGCCAGTAGTGGAAAATTGACGGTG |
All Microarray Probes Designed to Gene DMG400028185
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2200_PI426222305 | JHI_St_60k_v1 | DMT400072448 | CTCTAATACTCTCATAAAATTCAGCCTCGAAGAATTCTCTAATTTCTTCAAATGGGTGAG |
| CUST_2087_PI426222305 | JHI_St_60k_v1 | DMT400072449 | ATTTCAATTTTTCGTGTGGAAGACGTGAAGGCGGATGCCAGTAGTGGAAAATTGACGGTG |
Microarray Signals from CUST_2087_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 28.1807 | 3.53899 | 0.972805 | 0.125811 |
| ABA 1h | 89.8253 | 7.65539 | 3.51812 | 0.236496 |
| ACC 1h | 44.4559 | 16.4019 | 1.23213 | 0.588586 |
| BABA 1h | 31.4948 | 3.80614 | 1.13814 | 0.138761 |
| Chitin 1h | 26.4817 | 3.47923 | 1.0239 | 0.134006 |
| Epi 1h | 31.9884 | 7.69381 | 1.20609 | 0.32999 |
| SA 1h | 29.9796 | 8.37883 | 0.933504 | 0.235451 |
| Me-JA 1h | 9.66827 | 3.93313 | 0.355245 | 0.186398 |
| Control 6h | 28.2854 | 7.06297 | 0.907359 | 0.196908 |
| ABA 6h | 59.2177 | 7.95619 | 1.91 | 0.157269 |
| ACC 6h | 26.076 | 4.2369 | 0.774812 | 0.122872 |
| BABA 6h | 34.809 | 4.94112 | 1.06258 | 0.134497 |
| Chitin 6h | 12.1671 | 3.66581 | 0.368234 | 0.136177 |
| Epi 6h | 27.9713 | 8.75719 | 0.763392 | 0.378162 |
| SA 6h | 15.0601 | 5.84058 | 0.444994 | 0.306845 |
| Me-JA 6h | 13.5104 | 5.68889 | 0.392435 | 0.15344 |
Source Transcript PGSC0003DMT400072449 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g084000.1 | +2 | 4e-133 | 392 | 243/348 (70%) | evidence_code:10F0H0E1IEG genomic_reference:SL2.50ch10 gene_region:63001705-63003208 transcript_region:SL2.50ch10:63001705..63003208+ go_terms:GO:0030001 functional_description:Heavy-metal-associated domain-containing protein-like (AHRD V1 *-*- Q6K9R4_ORYSJ); contains Interpro domain(s) IPR006121 Heavy metal transport/detoxification protein |
| TAIR PP10 | AT5G03380.1 | +2 | 3e-27 | 112 | 114/400 (29%) | Heavy metal transport/detoxification superfamily protein | chr5:832400-834301 REVERSE LENGTH=392 |